Issues

• Adding possibility for a collection of structures

  BioPandas/biopandas#142 · Filter by author gezmi opened on Apr 29, 2024
  1

• [RFC] Enabling Cython-based PDB parser backend for speed improvements

  BioPandas/biopandas#139 · Filter by author a-r-j opened on Aug 29, 2023
  6

• read_pdb_from_list() not containing newlines

  BioPandas/biopandas#130 · Filter by author uros-sipetic opened on Jun 29, 2023

• SettingWithCopyWarning

  BioPandas/biopandas#127 · Filter by author tommycarstensen opened on Apr 25, 2023

• Unable to export PDB DFs with model_id columns

  BioPandas/biopandas#124 · Filter by author a-r-j opened on Apr 21, 2023

• [Refactor] Reduce code duplication by using abstract base classes

  enhancementhelp wanted
  BioPandas/biopandas#117 · Filter by author a-r-j opened on Mar 27, 2023

• Using SIFTS data for renumbering residues to match the Uniprot sequence resids

  BioPandas/biopandas#110 · Filter by author mrauha opened on Aug 18, 2022
  1

• Biopandas PDB output formatting leads to a ton of segments when reading with MDAnalysis: reason and my quick fix

  bughelp wanted
  BioPandas/biopandas#109 · Filter by author mrauha opened on Aug 18, 2022
  1

• RMSD calculation for whole PDBs

  enhancement
  BioPandas/biopandas#69 · Filter by author LivC193 opened on Oct 9, 2020
  3

• column 'line_idx' gets 'object' d_type for empty frames.

  BioPandas/biopandas#64 · Filter by author ZivBA opened on Jun 4, 2020

• Missing files in the PyPi tarball

  BioPandas/biopandas#63 · Filter by author moorepants opened on May 10, 2020
  2

• Mol2 files bonds

  enhancement
  BioPandas/biopandas#54 · Filter by author btyukodi opened on Jul 6, 2018
  8

• Merging HETATM and ATOM entries into one DataFrame

  bugenhancement
  BioPandas/biopandas#53 · Filter by author rasbt opened on May 31, 2018

• Renumbering residues

  enhancement
  BioPandas/biopandas#51 · Filter by author ajasja opened on May 25, 2018
  9

• Handling multi-PDB files

  bugenhancement
  BioPandas/biopandas#50 · Filter by author rasbt opened on Apr 4, 2018

• Add/Parse Information about Secondary Structure Elements

  enhancement
  BioPandas/biopandas#40 · Filter by author rasbt opened on Jun 15, 2017

• Improve RMSD function to take molecular symmetry into consideration?

  enhancement
  BioPandas/biopandas#13 · Filter by author ravila4 opened on Nov 18, 2016
  1

• Adding a function to compute the lengths and angles of the bonds in the (PDB) molecule

  enhancement
  BioPandas/biopandas#11 · Filter by author rasbt opened on Nov 25, 2015

• Adding a function for Q-Score computation

  enhancement
  BioPandas/biopandas#8 · Filter by author rasbt opened on Nov 24, 2015

• Adding a SDF submodule and DataFrames

  enhancement
  BioPandas/biopandas#7 · Filter by author rasbt opened on Nov 24, 2015

• Add function for structural alignments via least-squares fit

  enhancement
  BioPandas/biopandas#5 · Filter by author rasbt opened on Nov 24, 2015
  4