helper scripts for starting/closing

[lachlancoin]

I wrote some helper scripts:

https://github.com/lachlancoin/gcloud

These have a 'start.sh' which basically chains together all the steps for setup , provisioning and launch

and end.sh which does all the shutdown

Also, in the realtime directory is a script for watching a folder which is accumulating seq data and synching to the cloud bucket.

Anyway, I ran the script and it seems to work ok, but anything I got wrong let me know.

[lachlancoin]

This is working well, but its spinning up two instances at startup, does that seem right? I thought it would initially just have one instance

[lachlancoin]

tagging @obsh

[Firedrops]

Do the 2 instances persist? It was normal for me there to be multiple instances for a few minutes when starting up, but spin down after awhile and only leave 1 active.

[lachlancoin]

yes they persist. once data put in pipe then 3 instances acitve

…

On Mon, 4 Mar 2019, 18:42 Firedrops ***@***.***> wrote: Do the 2 instances persist? It was normal for me there to be multiple instances for a few minutes when starting up, but spin down after awhile and only leave 1 active. — You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub <#97 (comment)>, or mute the thread <https://github.com/notifications/unsubscribe-auth/AD01ZBq8fBRdJndwC5hZqPT9tiMLR9UQks5vTNxtgaJpZM4baU2f> .

[lachlancoin]

Ok, so it seems that having 2 instances at the start maybe just for the minimap2 docker you did @Firedrops , and not for the BWA docker.