diff --git a/.prettierignore b/.prettierignore index 9111cb81..ca3150c8 100644 --- a/.prettierignore +++ b/.prettierignore @@ -5,6 +5,8 @@ node_modules .vscode coverage cql4browsers.js +# the following uses its own prettier config +test-server # the following are generated by the test generator test/elm/*/data.js test/elm/external/Included.js diff --git a/README.md b/README.md index 88204c38..e70f4eed 100644 --- a/README.md +++ b/README.md @@ -350,6 +350,10 @@ modification to the test data text file, you can setup a process to _watch_ for regenerate the `data.js` files every time it detects changes in the source text file. Simply execute `npm run watch:test-data`. +# Using the Test Server and CQL Tests Runner + +See [test-server/README.md](test-server/README.md). + # Pull Requests If TypeScript source code is modified, `cql4browsers.js` needs to be included in the pull request, diff --git a/eslint.config.mjs b/eslint.config.mjs index 5e2abe33..996fd60b 100644 --- a/eslint.config.mjs +++ b/eslint.config.mjs @@ -19,6 +19,7 @@ export default defineConfig([ '**/.eslintrc.json', '**/lib', '**/lib-test', + 'test-server', 'examples/browser/cql4browsers.js', 'test/elm/library/data-with-namespace.js' ]), diff --git a/package-lock.json b/package-lock.json index cf5b3a01..8e0dd014 100644 --- a/package-lock.json +++ b/package-lock.json @@ -394,9 +394,9 @@ } }, "node_modules/@eslint/config-array/node_modules/brace-expansion": { - "version": "5.0.4", - "resolved": "https://registry.npmjs.org/brace-expansion/-/brace-expansion-5.0.4.tgz", - "integrity": "sha512-h+DEnpVvxmfVefa4jFbCf5HdH5YMDXRsmKflpf1pILZWRFlTbJpxeU55nJl4Smt5HQaGzg1o6RHFPJaOqnmBDg==", + "version": "5.0.5", + "resolved": "https://registry.npmjs.org/brace-expansion/-/brace-expansion-5.0.5.tgz", + "integrity": "sha512-VZznLgtwhn+Mact9tfiwx64fA9erHH/MCXEUfB/0bX/6Fz6ny5EGTXYltMocqg4xFAQZtnO3DHWWXi8RiuN7cQ==", "dev": true, "license": "MIT", "dependencies": { @@ -1227,9 +1227,9 @@ } }, "node_modules/@typescript-eslint/typescript-estree/node_modules/brace-expansion": { - 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"node": "20 || >=22" + "node": "18 || 20 || >=22" } }, "node_modules/eslint/node_modules/eslint-visitor-keys": { @@ -4286,9 +4286,9 @@ } }, "node_modules/mocha/node_modules/brace-expansion": { - "version": "2.0.2", - "resolved": "https://registry.npmjs.org/brace-expansion/-/brace-expansion-2.0.2.tgz", - "integrity": "sha512-Jt0vHyM+jmUBqojB7E1NIYadt0vI0Qxjxd2TErW94wDz+E2LAm5vKMXXwg6ZZBTHPuUlDgQHKXvjGBdfcF1ZDQ==", + "version": "2.1.0", + "resolved": "https://registry.npmjs.org/brace-expansion/-/brace-expansion-2.1.0.tgz", + "integrity": "sha512-TN1kCZAgdgweJhWWpgKYrQaMNHcDULHkWwQIspdtjV4Y5aurRdZpjAqn6yX3FPqTA9ngHCc4hJxMAMgGfve85w==", "dev": true, "license": "MIT", "dependencies": { @@ -4460,9 +4460,9 @@ } }, "node_modules/nyc/node_modules/brace-expansion": { - "version": "5.0.4", - "resolved": "https://registry.npmjs.org/brace-expansion/-/brace-expansion-5.0.4.tgz", - "integrity": "sha512-h+DEnpVvxmfVefa4jFbCf5HdH5YMDXRsmKflpf1pILZWRFlTbJpxeU55nJl4Smt5HQaGzg1o6RHFPJaOqnmBDg==", + "version": "5.0.5", + "resolved": "https://registry.npmjs.org/brace-expansion/-/brace-expansion-5.0.5.tgz", + "integrity": "sha512-VZznLgtwhn+Mact9tfiwx64fA9erHH/MCXEUfB/0bX/6Fz6ny5EGTXYltMocqg4xFAQZtnO3DHWWXi8RiuN7cQ==", "dev": true, "license": "MIT", "dependencies": { @@ -4985,9 +4985,9 @@ "license": "ISC" }, "node_modules/picomatch": { - 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This server is intended to be used as a target for the [cql-tests-runner](https://github.com/cqframework/cql-tests-runner) and is tuned specifically for that use case. + +## Endpoint + +- POST `/fhir/$cql` + - Example request: + ```json + { + "resourceType": "Parameters", + "parameter": [{ "name": "expression", "valueString": "1 + 2" }] + } + ``` + - Example response: + ```json + { + "resourceType": "Parameters", + "parameter": [{ "name": "return", "valueInteger": 3 }] + } + ``` + - Errors: + - HTTP 400 if the `expression` parameter is missing or empty + - HTTP 500 if there is an unexpected / unrecoverable server-side error + +## Prerequisites + +This project uses Node.js. It has been tested using Node 24 but should work with any recent LTS version. + +## Developing Scripts + +The `package.json` file defines scripts to support development of the test-server source code. These include: + +- `npm run lint`: run eslint against the test-server source code +- `npm run lint:fix`: fix eslint errors (as possible) +- `npm run prettier`: run prettier against the test-server source code +- `npm run prettier:fix`: fix prettier violations (as possible) +- `npm test`: run the unit tests + +Scripts for building and running the server are documented below. + +## Start The Server + +From this directory: + +### Install dependencies: + +```sh +npm install +``` + +### Development mode: + +```sh +npm run dev +``` + +The development mode builds the `cql-execution` source (to ensure it uses the latest changes) before running the server. It watches for changes to the `test-server` source and hot-reloads as necessary. By default, it uses the javascript CQL-to-ELM translator and listens on `http://localhost:8000`. + +_NOTE: The watch mode will NOT detect or hot-reload changes in the `cql-execution` source. You must stop and restart the `test-server` to pick up changes in the `cql-execution` source._ + +# Production mode:: + +```sh +npm run build +npm start +``` + +The production mode builds the `cql-execution` source and `test-server` source then runs the server _without_ watching for changes. By default, it uses the javascript CQL-to-ELM translator and listens on `http://localhost:8000`. + +### Configuration + +- `PORT` (optional): Port to bind. Defaults to `8000`. +- `USE_TRANSLATION_SERVICE` (optional, default: `false`): If `true`, the server will use a local [CQL Translation Service](https://github.com/cqframework/cql-translation-service) for CQL-to-ELM. In this case, the CQL Translation service must be running and available at `http://localhost:8080`. If `false`, the server will use the javascript CQL-to-ELM module to compile CQL. + +You can export these variable before running the server or place them in a `.env` file: + +```ini +PORT=8000 +USE_TRANSLATION_SERVICE=false +``` + +## Quick Test With curl + +```sh +curl -X POST http://localhost:8000/fhir/\$cql \ + -H "Content-Type: application/fhir+json" \ + -d '{ + "resourceType": "Parameters", + "parameter": [ + { "name": "expression", "valueString": "1 + 2" } + ] + }' +``` + +## Use With cql-tests-runner + +This server is designed to be a `$cql` target for the [cql-tests-runner](https://github.com/cqframework/cql-tests-runner). To execute the test-runner against this server: + +1. Download or clone the `cql-tests-runner` repository. + +2. Start this test-server (see above), e.g. at `http://localhost:8000`. + +3. In cql-tests-runner folder, create or edit a [test runner configuration](https://github.com/cqframework/cql-tests-runner?tab=readme-ov-file#configuration-settings) that points to the test-server endpoint. If you are using port 8000, you may choose to use the existing [conf/cql-execution-local.json](https://github.com/cqframework/cql-tests-runner/blob/main/conf/cql-execution-local.json) file. + +4. Run the tests from the cql-tests-runner folder: + + ```sh + npm install + git submodule update --init --recursive + npx tsx src/bin/cql-tests.ts run-tests conf/cql-execution-local.json ./results + ``` + +The runner will POST each test expression to `http://localhost:8000/fhir/$cql` and expect FHIR `Parameters` responses per the mapping. The test-server logs each incoming expression, the raw result, and the result mapped to `FHIR Parameters`. When the run is done, you can find the results in the cql-tests-runner folder's `results` sub-folder. + diff --git a/test-server/eslint.config.mjs b/test-server/eslint.config.mjs new file mode 100644 index 00000000..266f3811 --- /dev/null +++ b/test-server/eslint.config.mjs @@ -0,0 +1,52 @@ +import { defineConfig, globalIgnores } from 'eslint/config'; +import globals from 'globals'; +import tsParser from '@typescript-eslint/parser'; +import path from 'node:path'; +import { fileURLToPath } from 'node:url'; +import js from '@eslint/js'; +import { FlatCompat } from '@eslint/eslintrc'; + +const __filename = fileURLToPath(import.meta.url); +const __dirname = path.dirname(__filename); +const compat = new FlatCompat({ + baseDirectory: __dirname, + recommendedConfig: js.configs.recommended, + allConfig: js.configs.all +}); + +export default defineConfig([ + globalIgnores(['dist', 'node_modules']), + { + extends: compat.extends('plugin:@typescript-eslint/recommended', 'prettier'), + languageOptions: { + globals: { + ...globals.node, + ...globals.mocha + }, + parser: tsParser, + ecmaVersion: 6, + sourceType: 'module', + parserOptions: { + ecmaFeatures: { experimentalObjectRestSpread: true } + } + }, + rules: { + '@typescript-eslint/no-require-imports': 'off', + '@typescript-eslint/no-explicit-any': 'off', + 'no-unused-vars': 'off', // redundant to rule below + '@typescript-eslint/no-unused-vars': ['error', { argsIgnorePattern: '^_' }], + indent: ['error', 2, { SwitchCase: 1 }], + 'no-console': ['warn', { allow: ['warn', 'error'] }], + 'no-loss-of-precision': 'off', + quotes: ['error', 'single', { allowTemplateLiterals: true, avoidEscape: true }], + semi: ['error', 'always'], + curly: 'error' + } + }, + { + files: ['test/**/*.{js,ts}', 'examples/**/*.js', 'bin/**/*.js'], + rules: { + '@typescript-eslint/no-var-requires': 'off' + } + } +]); diff --git a/test-server/package-lock.json b/test-server/package-lock.json new file mode 100644 index 00000000..afa6b6b6 --- 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"dotenv": "^17.3.1", + "express": "^5.2.1", + "tslog": "^4.9.3" + }, + "devDependencies": { + "@eslint/eslintrc": "^3.3.5", + "@eslint/js": "^10.0.1", + "@types/express": "^5.0.6", + "@types/fhir": "^0.0.41", + "@types/node": "^25.5.0", + "@typescript-eslint/eslint-plugin": "^8.58.2", + "@typescript-eslint/parser": "^8.58.2", + "copyfiles": "^2.4.1", + "eslint": "^10.2.0", + "eslint-config-prettier": "^10.1.8", + "prettier": "^3.8.1", + "ts-node": "^10.9.2", + "tsx": "^4.21.0", + "typescript": "^5.9.3", + "vitest": "^4.1.4" + } +} diff --git a/test-server/src/app.ts b/test-server/src/app.ts new file mode 100644 index 00000000..9830ca0d --- /dev/null +++ b/test-server/src/app.ts @@ -0,0 +1,31 @@ +import express, { type Request, type Response } from 'express'; +import dotenv from 'dotenv'; +import logger from './logger'; +import { $cql } from './operation'; + +dotenv.config(); + +const app = express(); +app.use(express.json()); +const port = process.env.PORT || 8000; + +app.post('/fhir/$cql', async (req: Request, res: Response) => { + try { + const body = req.body as unknown as { parameter?: any }; + const expression = body?.parameter?.find((p: any) => p.name === 'expression')?.valueString; + if (!expression || typeof expression !== 'string' || expression.trim() === '') { + return res.status(400).json({ + error: "Missing 'expression' parameter with CQL valueString in request body" + }); + } + const parameters = await $cql(expression); + res.json(parameters); + } catch (err) { + logger.error(`Error handling /fhir/$cql:`, err); + return res.status(500).json({ error: 'Internal Server Error' }); + } +}); + +app.listen(port, () => { + logger.info(`Ready to accept posts to http://localhost:${port}/fhir/$cql`); +}); diff --git a/test-server/src/convert/convert.ts b/test-server/src/convert/convert.ts new file mode 100644 index 00000000..02b6b55f --- /dev/null +++ b/test-server/src/convert/convert.ts @@ -0,0 +1,385 @@ +import { + Coding, + ParametersParameter, + Quantity as FhirQuantity, + Ratio as FhirRatio, + CodeableConcept, + Period, + Range, + Element, + Parameters +} from 'fhir/r4'; +import { + AnyTypeSpecifier, + Code, + Concept, + Date as CqlDate, + DateTime as CqlDateTime, + Quantity as CqlQuantity, + Ratio as CqlRatio, + Interval, + IntervalTypeSpecifier, + ListTypeSpecifier, + TupleTypeSpecifier +} from '../../..'; +import { guessSpecifierType, typeToCqlTypeSpecifier, typeToCqlTypeString } from './cqlTypes'; +import { emptyListParameter, nullValueParameter, emptyTupleParameter } from './specialParameters'; +import logger from '../logger'; + +const CQL_TO_UCUM_PRECISION = { + year: 'a', + month: 'mo', + day: 'd', + hour: 'h', + minute: 'min', + second: 's', + millisecond: 'ms' +}; + +export function toParameters(result: any | null, type?: string | AnyTypeSpecifier): Parameters { + // If the type is null or is Any, try to guess a more specific type to get better conversion results + if (type == null || type === '{urn:hl7-org:elm-types:r1}Any') { + const guessedType = guessSpecifierType(result); + if (guessedType) { + type = guessedType; + } + } + + const cqlTypeString = typeToCqlTypeString(type); + const cqlTypeSpecifier = typeToCqlTypeSpecifier(type); + const extension = [ + { + url: 'http://hl7.org/fhir/StructureDefinition/cqf-cqlType', + valueString: cqlTypeString + } + ]; + + let parameters: ParametersParameter[]; + if (/^List<.*>$/.test(cqlTypeString) && Array.isArray(result)) { + if (result.length) { + const listTypeSpecifier = cqlTypeSpecifier as ListTypeSpecifier; + parameters = result.map(r => ({ + extension, + ...toParameter('return', r, listTypeSpecifier.elementType) + })); + } else { + parameters = [{ extension, ...emptyListParameter('return') }]; + } + } else { + parameters = [{ extension, ...toParameter('return', result, cqlTypeSpecifier) }]; + } + return { + resourceType: 'Parameters', + parameter: parameters + }; +} + +function toParameter( + name: string, + result: any | null, + typeSpecifier?: AnyTypeSpecifier +): ParametersParameter { + if (result == null) { + return nullValueParameter(name); + } + + // If it's an uncertainty, serialize it as a point or Interval + if (result.isUncertainty) { + if (result.isPoint()) { + return toParameter(name, result.low, typeSpecifier); + } else { + const ivlResult = new Interval(result.low, result.high, true, true); + const ivlType = { + type: 'IntervalTypeSpecifier', + pointType: typeSpecifier + } as IntervalTypeSpecifier; + return toParameter(name, ivlResult, ivlType); + } + } + + // Map to FHIR based on https://build.fhir.org/ig/HL7/cql-ig/en/conformance.html#fhir-type-mapping + // and reverse mappings from https://build.fhir.org/ig/HL7/cql-ig/en/Library-FHIRHelpers.html + const cqlTypeString = typeToCqlTypeString(typeSpecifier); + switch (cqlTypeString) { + case 'System.Any': + return toAnyParameter(name, result); + case 'System.Boolean': + return toBooleanParameter(name, result); + case 'System.Integer': + return toIntegerParameter(name, result); + case 'System.Long': + return toLongParameter(name, result); + case 'System.Decimal': + return toDecimalParameter(name, result); + case 'System.Date': + return toDateParameter(name, result); + case 'System.DateTime': + case 'System.Time': + return toDateTimeOrTimeParameter(name, result); + case 'System.String': + return toStringParameter(name, result); + case 'System.Quantity': + return toQuantityParameter(name, result); + case 'System.Ratio': + return toRatioParameter(name, result); + case 'System.Code': + return toCodeParameter(name, result); + case 'System.Concept': + return toConceptParameter(name, result); + case cqlTypeString.match(/^List<.+>$/)?.[0]: + return toNestedListParameter(name, result, typeSpecifier); + case cqlTypeString.match(/^Interval$/)?.[0]: + return toPeriodParameter(name, result); + case cqlTypeString.match(/^Interval$/)?.[0]: + // Apparently the intention of the CQL-to-FHIR mappings is to map numeric intervals to Ranges too, + // but as of early April 2026, the CQL Test Runner fails all tests that map numeric intervals to + // Ranges, so for now let those cases fall through to Interval-to-Tuple conversion below. + // case cqlTypeString.match(/^Interval$/)?.[0]: + // case cqlTypeString.match(/^Interval$/)?.[0]: + // case cqlTypeString.match(/^Interval$/)?.[0]: + const isIntegerOrLong = false; // /^Interval$/.test(cqlTypeString); + return toRangeParameter(name, result, isIntegerOrLong); + case cqlTypeString.match(/^Interval<.+>$/)?.[0]: + return toIntervalTupleParameter(name, result, typeSpecifier); + case cqlTypeString.match(/^Tuple<.+>$/)?.[0]: + return toTupleParameter(name, result, typeSpecifier); + case cqlTypeString.match(/^Choice<.+>$/)?.[0]: + return toChoiceParameter(name, result, typeSpecifier); + } + return { name }; +} + +function toAnyParameter(name: string, result: any): ParametersParameter { + // Guess the type from the value and try again + const guessedType = guessSpecifierType(result); + if (guessedType) { + return toParameter(name, result, guessedType); + } + // Fallback to something that is likely wrong but might be helpful for debugging + return { name, valueString: JSON.stringify(result) }; +} + +function toBooleanParameter(name: string, result: boolean): ParametersParameter { + return { name, valueBoolean: result }; +} + +function toIntegerParameter(name: string, result: number): ParametersParameter { + return { name, valueInteger: result }; +} + +function toLongParameter(name: string, result: number): ParametersParameter { + // TODO: use valueInteger64 for FHIR R5 and above + return { name, valueString: String(result) }; +} + +function toDecimalParameter(name: string, result: number): ParametersParameter { + // TODO: use the quantity-precision extension to communicate precision of the value + return { name, valueDecimal: result }; +} + +function toDateParameter(name: string, result: CqlDate) { + return { name, valueDate: result.toString() }; +} + +function toDateTimeOrTimeParameter(name: string, result: CqlDateTime) { + return setFhirDateTimeWithPrecision( + { name }, + result.isTime() ? 'valueTime' : 'valueDateTime', + result + ); +} + +function toStringParameter(name: string, result: string): ParametersParameter { + return { name, valueString: result }; +} + +function toQuantityParameter(name: string, result: CqlQuantity | number): ParametersParameter { + return { name, valueQuantity: toFhirQuantity(result) }; +} + +function toRatioParameter(name: string, result: CqlRatio) { + return { + name, + valueRatio: { + numerator: toFhirQuantity(result.numerator), + denominator: toFhirQuantity(result.denominator) + } as FhirRatio + }; +} + +function toCodeParameter(name: string, result: Code): ParametersParameter { + return { name, valueCoding: toFhirCoding(result) }; +} + +function toConceptParameter(name: string, result: Concept) { + const conceptParam = { + name, + valueCodeableConcept: { coding: result.codes.map(toFhirCoding) } as CodeableConcept + }; + if (result.display) { + conceptParam.valueCodeableConcept.text = result.display; + } + return conceptParam; +} + +function toNestedListParameter( + name: string, + result: any[], + typeSpecifier: AnyTypeSpecifier | undefined +) { + let part: ParametersParameter[]; + if (Array.isArray(result) && result.length) { + part = (result as any[]).map(r => + toParameter('element', r, (typeSpecifier as ListTypeSpecifier).elementType) + ); + } else { + part = [emptyListParameter('element')]; + } + return { name, part }; +} + +function toPeriodParameter(name: string, result: Interval) { + const periodResult = result.toClosed(); + const periodParam = { name, valuePeriod: {} as Period }; + if (result.low) { + setFhirDateTimeWithPrecision(periodParam.valuePeriod, 'start', periodResult.low); + } + if (result.high) { + setFhirDateTimeWithPrecision(periodParam.valuePeriod, 'end', periodResult.high); + } + return periodParam; +} + +function toRangeParameter(name: string, result: Interval, isIntegerOrLong: boolean) { + const rangeResult = result.toClosed(); + const rangeParam = { name, valueRange: {} as Range }; + if (rangeResult.low) { + rangeParam.valueRange.low = toFhirQuantity(rangeResult.low, isIntegerOrLong); + } + if (rangeResult.high) { + rangeParam.valueRange.high = toFhirQuantity(rangeResult.high, isIntegerOrLong); + } + return rangeParam; +} + +function toIntervalTupleParameter( + name: string, + result: Interval, + typeSpecifier: AnyTypeSpecifier | undefined +) { + const pointType = (typeSpecifier as IntervalTypeSpecifier).pointType; + return { + name, + part: [ + toParameter('low', result.low, pointType), + toParameter('lowClosed', result.lowClosed ?? true, typeToCqlTypeSpecifier('System.Boolean')), + toParameter('high', result.high, pointType), + toParameter('highClosed', result.highClosed ?? true, typeToCqlTypeSpecifier('System.Boolean')) + ] + }; +} + +function toTupleParameter(name: string, result: any, typeSpecifier: AnyTypeSpecifier | undefined) { + let tupleParam: ParametersParameter; + const tupleKeys = Object.keys(result); + if (tupleKeys.length) { + const tupleTypeSpecifier = typeSpecifier as TupleTypeSpecifier; + tupleParam = { + name, + part: tupleKeys.map(key => { + const elementTypeSpecifier = tupleTypeSpecifier.element?.find( + e => e.name === key + )?.elementType; + return toParameter(key, result[key], elementTypeSpecifier); + }) + }; + } else { + tupleParam = emptyTupleParameter(name); + } + return tupleParam; +} + +function toChoiceParameter(name: string, result: any, typeSpecifier: AnyTypeSpecifier | undefined) { + logger.error('CHOICETYPE NOT SUPPORTED', typeToCqlTypeString(typeSpecifier)); + return { name }; +} + +function toFhirQuantity(val: CqlQuantity | number, isIntegerOrLong = false): FhirQuantity { + let fq: FhirQuantity; + if (typeof val === 'number') { + fq = { value: val }; + } else { + const cq = val as CqlQuantity; + fq = { value: cq.value } as FhirQuantity; + if (cq.unit != null) { + fq.unit = fq.code = cq.unit; + if ( + ['millisecond', 'second', 'minute', 'hour', 'day', 'week', 'month', 'year'].includes( + cq.unit + ) + ) { + fq.system = 'http://hl7.org/fhirpath/CodeSystem/calendar-units'; + } else { + fq.system = 'http://unitsofmeasure.org'; + } + } + } + if (isIntegerOrLong) { + // @ts-expect-error R4 Quantity type should allow _value for setting id and extension on decimal value + fq._value = { + extension: [ + { url: 'http://hl7.org/fhir/StructureDefinition/quantity-precision', valueInteger: 0 } + ] + }; + } + + return fq; +} + +function toFhirCoding(cc: Code): Coding { + const fc = { code: cc.code } as Coding; + if (cc.system) { + fc.system = cc.system; + } + if (cc.version) { + fc.version = cc.version; + } + if (cc.display) { + fc.display = cc.display; + } + return fc; +} + +function setFhirDateTimeWithPrecision( + container: T, + elementName: string, + dateTime: CqlDateTime +): T { + if (dateTime.hour != null && dateTime.second == null) { + // FHIR dateTime/time requires minutes and seconds if hours are present + const fullDT = dateTime.copy(); + if (dateTime.minute == null) { + fullDT.minute = 0; + } + if (dateTime.second == null) { + fullDT.second = 0; + } + (container as any)[elementName] = fullDT.toString(); + } else { + (container as any)[elementName] = dateTime.toString(); + } + + const precision = dateTime.getPrecision() as keyof typeof CQL_TO_UCUM_PRECISION; + if (precision) { + (container as any)[`_${elementName}` as keyof ParametersParameter] = { + extension: [ + { + url: 'http://hl7.org/fhir/StructureDefinition/time-precision', + valueCode: CQL_TO_UCUM_PRECISION[precision] + } + ] + } as Element; + } + + return container; +} diff --git a/test-server/src/convert/cqlTypes.ts b/test-server/src/convert/cqlTypes.ts new file mode 100644 index 00000000..a5913cc4 --- /dev/null +++ b/test-server/src/convert/cqlTypes.ts @@ -0,0 +1,104 @@ +import { + NamedTypeSpecifier, + ChoiceTypeSpecifier, + IntervalTypeSpecifier, + ListTypeSpecifier, + TupleTypeSpecifier, + TupleElementDefinition, + AnyTypeSpecifier +} from '../../..'; + +export function typeToCqlTypeSpecifier( + typeOrSpecifier: string | AnyTypeSpecifier = '{urn:hl7-org:elm-types:r1}Any' +): AnyTypeSpecifier { + if (typeof typeOrSpecifier === 'string') { + return { + type: 'NamedTypeSpecifier', + name: typeOrSpecifier.replace(/^System\./, '{urn:hl7-org:elm-types:r1}') + } as NamedTypeSpecifier; + } + return typeOrSpecifier; +} + +// NOTE: Slightly modified from code in cql-execution: src/elm/type.ts +export function typeToCqlTypeString( + typeOrSpecifier: string | AnyTypeSpecifier = '{urn:hl7-org:elm-types:r1}Any' +): string { + if (typeof typeOrSpecifier === 'string') { + return typeOrSpecifier.replace('{urn:hl7-org:elm-types:r1}', 'System.'); + } else if (typeOrSpecifier == null || typeOrSpecifier.type == null) { + return 'System.Any'; + } + switch (typeOrSpecifier.type) { + case 'NamedTypeSpecifier': + return (typeOrSpecifier as NamedTypeSpecifier).name.replace( + '{urn:hl7-org:elm-types:r1}', + 'System.' + ); + case 'ListTypeSpecifier': + return `List<${typeToCqlTypeString((typeOrSpecifier as ListTypeSpecifier).elementType)}>`; + case 'TupleTypeSpecifier': + return `Tuple<${(typeOrSpecifier as TupleTypeSpecifier).element?.map((e: any) => `${e.name} ${typeToCqlTypeString(e.elementType)}`).join(', ')}>`; + case 'IntervalTypeSpecifier': + return `Interval<${typeToCqlTypeString((typeOrSpecifier as IntervalTypeSpecifier).pointType)}>`; + case 'ChoiceTypeSpecifier': + return `Choice<${(typeOrSpecifier as ChoiceTypeSpecifier).choice?.map((c: any) => typeToCqlTypeString(c)).join(', ')}>`; + default: + return JSON.stringify(typeOrSpecifier); + } +} + +// NOTE: Slightly modified from code in cql-execution: src/elm/type.ts +export function guessSpecifierType(val: any): AnyTypeSpecifier | undefined { + if (val == null) { + return; + } + const typeHierarchy = typeof val._typeHierarchy === 'function' && val._typeHierarchy(); + if (typeHierarchy && typeHierarchy.length > 0) { + return typeHierarchy[0]; + } else if (typeof val === 'boolean') { + return { type: 'NamedTypeSpecifier', name: '{urn:hl7-org:elm-types:r1}Boolean' }; + } else if (typeof val === 'number' && Math.floor(val) === val) { + // It could still be a decimal, but we have to just take our best guess! + return { type: 'NamedTypeSpecifier', name: '{urn:hl7-org:elm-types:r1}Integer' }; + } else if (typeof val === 'number') { + return { type: 'NamedTypeSpecifier', name: '{urn:hl7-org:elm-types:r1}Decimal' }; + } else if (typeof val === 'string') { + return { type: 'NamedTypeSpecifier', name: '{urn:hl7-org:elm-types:r1}String' }; + } else if (val.isConcept) { + return { type: 'NamedTypeSpecifier', name: '{urn:hl7-org:elm-types:r1}Concept' }; + } else if (val.isCode) { + return { type: 'NamedTypeSpecifier', name: '{urn:hl7-org:elm-types:r1}Code' }; + } else if (val.isDate) { + return { type: 'NamedTypeSpecifier', name: '{urn:hl7-org:elm-types:r1}Date' }; + } else if (val.isTime && val.isTime()) { + return { type: 'NamedTypeSpecifier', name: '{urn:hl7-org:elm-types:r1}Time' }; + } else if (val.isDateTime) { + return { type: 'NamedTypeSpecifier', name: '{urn:hl7-org:elm-types:r1}DateTime' }; + } else if (val.isQuantity) { + return { type: 'NamedTypeSpecifier', name: '{urn:hl7-org:elm-types:r1}Quantity' }; + } else if (Array.isArray(val)) { + // Get unique types from the array (by converting to string and putting in a Set) + const typesAsStrings = Array.from(new Set(val.map(v => JSON.stringify(guessSpecifierType(v))))); + const types = typesAsStrings.map(ts => (/^{/.test(ts) ? JSON.parse(ts) : ts)); + return { + type: 'ListTypeSpecifier', + elementType: types.length == 1 ? types[0] : { type: 'ChoiceTypeSpecifier', choice: types } + }; + } else if (val.isInterval) { + return { + type: 'IntervalTypeSpecifier', + pointType: typeToCqlTypeSpecifier((val as Interval).pointType) + }; + } else if (val.isUncertainty) { + return guessSpecifierType(val.low ?? val.high); + } else if (typeof val === 'object' && Object.keys(val).length > 0) { + return { + type: 'TupleTypeSpecifier', + element: Object.keys(val).map( + k => ({ name: k, elementType: guessSpecifierType(val[k]) }) as TupleElementDefinition + ) + }; + } + return; +} diff --git a/test-server/src/convert/index.ts b/test-server/src/convert/index.ts new file mode 100644 index 00000000..c5b7be79 --- /dev/null +++ b/test-server/src/convert/index.ts @@ -0,0 +1 @@ +export * from './convert'; diff --git a/test-server/src/convert/specialParameters.ts b/test-server/src/convert/specialParameters.ts new file mode 100644 index 00000000..d14d0f3c --- /dev/null +++ b/test-server/src/convert/specialParameters.ts @@ -0,0 +1,39 @@ +export function emptyListParameter(name: string) { + return { + name, + _valueBoolean: { + extension: [ + { + url: 'http://hl7.org/fhir/StructureDefinition/cqf-isEmptyList', + valueBoolean: true + } + ] + } + }; +} +export function emptyTupleParameter(name: string) { + return { + name, + _valueBoolean: { + extension: [ + { + url: 'http://hl7.org/fhir/StructureDefinition/cqf-isEmptyTuple', + valueBoolean: true + } + ] + } + }; +} +export function nullValueParameter(name: string) { + return { + name, + _valueBoolean: { + extension: [ + { + url: 'http://hl7.org/fhir/StructureDefinition/data-absent-reason', + valueCode: 'unknown' + } + ] + } + }; +} diff --git a/test-server/src/logger.ts b/test-server/src/logger.ts new file mode 100644 index 00000000..ce8ba4ab --- /dev/null +++ b/test-server/src/logger.ts @@ -0,0 +1,9 @@ +import { Logger } from 'tslog'; + +const logger = new Logger({ + hideLogPositionForProduction: true, + prettyInspectOptions: { depth: null }, + prettyLogTemplate: '{{logLevelName}}\t' +}); + +export default logger; diff --git a/test-server/src/operation.ts b/test-server/src/operation.ts new file mode 100644 index 00000000..3ab2d71d --- /dev/null +++ b/test-server/src/operation.ts @@ -0,0 +1,38 @@ +import { Parameters } from 'fhir/r4'; +import logger from './logger'; +import { translate } from './translate'; +import { CodeService, DateTime, Executor, Library } from '../..'; +import { PatientSource } from 'cql-exec-fhir'; +import { toParameters } from './convert'; + +const USE_TRANSLATION_SERVICE = process.env['USE_TRANSLATION_SERVICE'] == 'true'; + +let counter = 0; + +export async function $cql(expression: string): Promise { + const id = counter++; + logger.debug(`[${id}] Expression: ${expression}`); + + // 1: Translate CQL to ELM + const elm = await translate(expression, USE_TRANSLATION_SERVICE); + + // 2: Execute ELM + const library = new Library(elm); + const codeService = new CodeService(); + const patientSource = PatientSource.FHIRv401(); + const executionDateTime = DateTime.fromJSDate(new Date(), 0); + const executor = new Executor(library, codeService); + const result = await executor.exec(patientSource, executionDateTime); + logger.debug(`[${id}] Raw Result: `, result.unfilteredResults.expression); + + // 3: Convert the result to a FHIR Parameter + const resultType = elm.library?.statements?.def?.[0]?.resultTypeName; + const resultTypeSpecifier = elm.library?.statements?.def?.[0]?.resultTypeSpecifier; + const parameters = toParameters( + result.unfilteredResults.expression, + resultTypeSpecifier ?? resultType + ); + logger.debug(`[${id}] FHIR Result: `, parameters); + + return parameters; +} diff --git a/test-server/src/translate/index.ts b/test-server/src/translate/index.ts new file mode 100644 index 00000000..d17b42cb --- /dev/null +++ b/test-server/src/translate/index.ts @@ -0,0 +1 @@ +export * from './translate'; diff --git a/test-server/src/translate/libraries/FHIRHelpers-4.0.1.cql b/test-server/src/translate/libraries/FHIRHelpers-4.0.1.cql new file mode 100644 index 00000000..eb6cd926 --- /dev/null +++ b/test-server/src/translate/libraries/FHIRHelpers-4.0.1.cql @@ -0,0 +1,520 @@ +/* +@author: Bryn Rhodes +@description: This library defines functions to convert between FHIR + data types and CQL system-defined types, as well as functions to support + FHIRPath implementation. For more information, the FHIRHelpers wiki page: + https://github.com/cqframework/clinical_quality_language/wiki/FHIRHelpers +@allowFluent: true +*/ +library FHIRHelpers version '4.0.1' + +using FHIR version '4.0.1' + +define function ToInterval(period FHIR.Period): + if period is null then + null + else + if period."start" is null then + Interval(period."start".value, period."end".value] + else + Interval[period."start".value, period."end".value] + +define function ToCalendarUnit(unit System.String): + case unit + when 'ms' then 'millisecond' + when 's' then 'second' + when 'min' then 'minute' + when 'h' then 'hour' + when 'd' then 'day' + when 'wk' then 'week' + when 'mo' then 'month' + when 'a' then 'year' + else unit + end + +define function ToQuantity(quantity FHIR.Quantity): + case + when quantity is null then null + when quantity.value is null then null + when quantity.comparator is not null then + Message(null, true, 'FHIRHelpers.ToQuantity.ComparatorQuantityNotSupported', 'Error', 'FHIR Quantity value has a comparator and cannot be converted to a System.Quantity value.') + when quantity.system is null or quantity.system.value = 'http://unitsofmeasure.org' + or quantity.system.value = 'http://hl7.org/fhirpath/CodeSystem/calendar-units' then + System.Quantity { value: quantity.value.value, unit: ToCalendarUnit(Coalesce(quantity.code.value, quantity.unit.value, '1')) } + else + Message(null, true, 'FHIRHelpers.ToQuantity.InvalidFHIRQuantity', 'Error', 'Invalid FHIR Quantity code: ' & quantity.unit.value & ' (' & quantity.system.value & '|' & quantity.code.value & ')') + end + +define function ToQuantityIgnoringComparator(quantity FHIR.Quantity): + case + when quantity is null then null + when quantity.value is null then null + when quantity.system is null or quantity.system.value = 'http://unitsofmeasure.org' + or quantity.system.value = 'http://hl7.org/fhirpath/CodeSystem/calendar-units' then + System.Quantity { value: quantity.value.value, unit: ToCalendarUnit(Coalesce(quantity.code.value, quantity.unit.value, '1')) } + else + Message(null, true, 'FHIRHelpers.ToQuantity.InvalidFHIRQuantity', 'Error', 'Invalid FHIR Quantity code: ' & quantity.unit.value & ' (' & quantity.system.value & '|' & quantity.code.value & ')') + end + +define function ToInterval(quantity FHIR.Quantity): + if quantity is null then null else + case quantity.comparator.value + when '<' then + Interval[ + null, + ToQuantityIgnoringComparator(quantity) + ) + when '<=' then + Interval[ + null, + ToQuantityIgnoringComparator(quantity) + ] + when '>=' then + Interval[ + ToQuantityIgnoringComparator(quantity), + null + ] + when '>' then + Interval( + ToQuantityIgnoringComparator(quantity), + null + ] + else + Interval[ToQuantity(quantity), ToQuantity(quantity)] + end + +define function ToRatio(ratio FHIR.Ratio): + if ratio is null then + null + else + System.Ratio { numerator: ToQuantity(ratio.numerator), denominator: ToQuantity(ratio.denominator) } + +define function ToInterval(range FHIR.Range): + if range is null then + null + else + Interval[ToQuantity(range.low), ToQuantity(range.high)] + +define function ToCode(coding FHIR.Coding): + if coding is null then + null + else + System.Code { + code: coding.code.value, + system: coding.system.value, + version: coding.version.value, + display: coding.display.value + } + +define function ToConcept(concept FHIR.CodeableConcept): + if concept is null then + null + else + System.Concept { + codes: concept.coding C return ToCode(C), + display: concept.text.value + } + +define function ToValueSet(uri String): + if uri is null then + null + else + System.ValueSet { + id: uri + } + +define function reference(reference String): + if reference is null then + null + else + Reference { reference: string { value: reference } } + +define function ToValue(value Choice): + case + when value is base64Binary then (value as base64Binary).value + when value is boolean then (value as boolean).value + when value is canonical then (value as canonical).value + when value is code then (value as code).value + when value is date then (value as date).value + when value is dateTime then (value as dateTime).value + when value is decimal then (value as decimal).value + when value is id then (value as id).value + when value is instant then (value as instant).value + when value is integer then (value as integer).value + when value is markdown then (value as markdown).value + when value is oid then (value as oid).value + when value is positiveInt then (value as positiveInt).value + when value is string then (value as string).value + when value is time then (value as time).value + when value is unsignedInt then (value as unsignedInt).value + when value is uri then (value as uri).value + when value is url then (value as url).value + when value is uuid then (value as uuid).value + when value is Age then ToQuantity(value as Age) + when value is CodeableConcept then ToConcept(value as CodeableConcept) + when value is Coding then ToCode(value as Coding) + when value is Count then ToQuantity(value as Count) + when value is Distance then ToQuantity(value as Distance) + when value is Duration then ToQuantity(value as Duration) + when value is Quantity then ToQuantity(value as Quantity) + when value is Range then ToInterval(value as Range) + when value is Period then ToInterval(value as Period) + when value is Ratio then ToRatio(value as Ratio) + else value as Choice + end + +define function resolve(reference String) returns Resource: external +define function resolve(reference Reference) returns Resource: external +define function reference(resource Resource) returns Reference: external +define function extension(element Element, url String) returns List: external +define function extension(resource DomainResource, url String) returns List: external +define function modifierExtension(element BackboneElement, url String) returns List: external +define function modifierExtension(resource DomainResource, url String) returns List: external +define function hasValue(element Element) returns Boolean: external +define function getValue(element Element) returns Any: external +define function ofType(identifier String) returns List: external +define function is(identifier String) returns Boolean: external +define function as(identifier String) returns Any: external +define function elementDefinition(element Element) returns ElementDefinition: external +define function slice(element Element, url String, name String) returns List: external +define function checkModifiers(resource Resource) returns Resource: external +define function checkModifiers(resource Resource, modifier String) returns Resource: external +define function checkModifiers(element Element) returns Element: external +define function checkModifiers(element Element, modifier String) returns Element: external +define function conformsTo(resource Resource, structure String) returns Boolean: external +define function memberOf(code code, valueSet String) returns Boolean: external +define function memberOf(coding Coding, valueSet String) returns Boolean: external +define function memberOf(concept CodeableConcept, valueSet String) returns Boolean: external +define function subsumes(coding Coding, subsumedCoding Coding) returns Boolean: external +define function subsumes(concept CodeableConcept, subsumedConcept CodeableConcept) returns Boolean: external +define function subsumedBy(coding Coding, subsumingCoding Coding) returns Boolean: external +define function subsumedBy(concept CodeableConcept, subsumingConcept CodeableConcept) returns Boolean: external +define function htmlChecks(element Element) returns Boolean: external + +define function ToString(value AccountStatus): value.value +define function ToString(value ActionCardinalityBehavior): value.value +define function ToString(value ActionConditionKind): value.value +define function ToString(value ActionGroupingBehavior): value.value +define function ToString(value ActionParticipantType): value.value +define function ToString(value ActionPrecheckBehavior): value.value +define function ToString(value ActionRelationshipType): value.value +define function ToString(value ActionRequiredBehavior): value.value +define function ToString(value ActionSelectionBehavior): value.value +define function ToString(value ActivityDefinitionKind): value.value +define function ToString(value ActivityParticipantType): value.value +define function ToString(value AddressType): value.value +define function ToString(value AddressUse): value.value +define function ToString(value AdministrativeGender): value.value +define function ToString(value AdverseEventActuality): value.value +define function ToString(value AggregationMode): value.value +define function ToString(value AllergyIntoleranceCategory): value.value +define function ToString(value AllergyIntoleranceCriticality): value.value +define function ToString(value AllergyIntoleranceSeverity): value.value +define function ToString(value AllergyIntoleranceType): value.value +define function ToString(value AppointmentStatus): value.value +define function ToString(value AssertionDirectionType): value.value +define function ToString(value AssertionOperatorType): value.value +define function ToString(value AssertionResponseTypes): value.value +define function ToString(value AuditEventAction): value.value +define function ToString(value AuditEventAgentNetworkType): value.value +define function ToString(value AuditEventOutcome): value.value +define function ToString(value BindingStrength): value.value +define function ToString(value BiologicallyDerivedProductCategory): value.value +define function ToString(value BiologicallyDerivedProductStatus): value.value +define function ToString(value BiologicallyDerivedProductStorageScale): value.value +define function ToString(value BundleType): value.value +define function ToString(value CapabilityStatementKind): value.value +define function ToString(value CarePlanActivityKind): value.value +define function ToString(value CarePlanActivityStatus): value.value +define function ToString(value CarePlanIntent): value.value +define function ToString(value CarePlanStatus): value.value +define function ToString(value CareTeamStatus): value.value +define function ToString(value CatalogEntryRelationType): value.value +define function ToString(value ChargeItemDefinitionPriceComponentType): value.value +define function ToString(value ChargeItemStatus): value.value +define function ToString(value ClaimResponseStatus): value.value +define function ToString(value ClaimStatus): value.value +define function ToString(value ClinicalImpressionStatus): value.value +define function ToString(value CodeSearchSupport): value.value +define function ToString(value CodeSystemContentMode): value.value +define function ToString(value CodeSystemHierarchyMeaning): value.value +define function ToString(value CommunicationPriority): value.value +define function ToString(value CommunicationRequestStatus): value.value +define function ToString(value CommunicationStatus): value.value +define function ToString(value CompartmentCode): value.value +define function ToString(value CompartmentType): value.value +define function ToString(value CompositionAttestationMode): value.value +define function ToString(value CompositionStatus): value.value +define function ToString(value ConceptMapEquivalence): value.value +define function ToString(value ConceptMapGroupUnmappedMode): value.value +define function ToString(value ConditionalDeleteStatus): value.value +define function ToString(value ConditionalReadStatus): value.value +define function ToString(value ConsentDataMeaning): value.value +define function ToString(value ConsentProvisionType): value.value +define function ToString(value ConsentState): value.value +define function ToString(value ConstraintSeverity): value.value +define function ToString(value ContactPointSystem): value.value +define function ToString(value ContactPointUse): value.value +define function ToString(value ContractPublicationStatus): value.value +define function ToString(value ContractStatus): value.value +define function ToString(value ContributorType): value.value +define function ToString(value CoverageStatus): value.value +define function ToString(value CurrencyCode): value.value +define function ToString(value DayOfWeek): value.value +define function ToString(value DaysOfWeek): value.value +define function ToString(value DetectedIssueSeverity): value.value +define function ToString(value DetectedIssueStatus): value.value +define function ToString(value DeviceMetricCalibrationState): value.value +define function ToString(value DeviceMetricCalibrationType): value.value +define function ToString(value DeviceMetricCategory): value.value +define function ToString(value DeviceMetricColor): value.value +define function ToString(value DeviceMetricOperationalStatus): value.value +define function ToString(value DeviceNameType): value.value +define function ToString(value DeviceRequestStatus): value.value +define function ToString(value DeviceUseStatementStatus): value.value +define function ToString(value DiagnosticReportStatus): value.value +define function ToString(value DiscriminatorType): value.value +define function ToString(value DocumentConfidentiality): value.value +define function ToString(value DocumentMode): value.value +define function ToString(value DocumentReferenceStatus): value.value +define function ToString(value DocumentRelationshipType): value.value +define function ToString(value EligibilityRequestPurpose): value.value +define function ToString(value EligibilityRequestStatus): value.value +define function ToString(value EligibilityResponsePurpose): value.value +define function ToString(value EligibilityResponseStatus): value.value +define function ToString(value EnableWhenBehavior): value.value +define function ToString(value EncounterLocationStatus): value.value +define function ToString(value EncounterStatus): value.value +define function ToString(value EndpointStatus): value.value +define function ToString(value EnrollmentRequestStatus): value.value +define function ToString(value EnrollmentResponseStatus): value.value +define function ToString(value EpisodeOfCareStatus): value.value +define function ToString(value EventCapabilityMode): value.value +define function ToString(value EventTiming): value.value +define function ToString(value EvidenceVariableType): value.value +define function ToString(value ExampleScenarioActorType): value.value +define function ToString(value ExplanationOfBenefitStatus): value.value +define function ToString(value ExposureState): value.value +define function ToString(value ExtensionContextType): value.value +define function ToString(value FHIRAllTypes): value.value +define function ToString(value FHIRDefinedType): value.value +define function ToString(value FHIRDeviceStatus): value.value +define function ToString(value FHIRResourceType): value.value +define function ToString(value FHIRSubstanceStatus): value.value +define function ToString(value FHIRVersion): value.value +define function ToString(value FamilyHistoryStatus): value.value +define function ToString(value FilterOperator): value.value +define function ToString(value FlagStatus): value.value +define function ToString(value GoalLifecycleStatus): value.value +define function ToString(value GraphCompartmentRule): value.value +define function ToString(value GraphCompartmentUse): value.value +define function ToString(value GroupMeasure): value.value +define function ToString(value GroupType): value.value +define function ToString(value GuidanceResponseStatus): value.value +define function ToString(value GuidePageGeneration): value.value +define function ToString(value GuideParameterCode): value.value +define function ToString(value HTTPVerb): value.value +define function ToString(value IdentifierUse): value.value +define function ToString(value IdentityAssuranceLevel): value.value +define function ToString(value ImagingStudyStatus): value.value +define function ToString(value ImmunizationEvaluationStatus): value.value +define function ToString(value ImmunizationStatus): value.value +define function ToString(value InvoicePriceComponentType): value.value +define function ToString(value InvoiceStatus): value.value +define function ToString(value IssueSeverity): value.value +define function ToString(value IssueType): value.value +define function ToString(value LinkType): value.value +define function ToString(value LinkageType): value.value +define function ToString(value ListMode): value.value +define function ToString(value ListStatus): value.value +define function ToString(value LocationMode): value.value +define function ToString(value LocationStatus): value.value +define function ToString(value MeasureReportStatus): value.value +define function ToString(value MeasureReportType): value.value +define function ToString(value MediaStatus): value.value +define function ToString(value MedicationAdministrationStatus): value.value +define function ToString(value MedicationDispenseStatus): value.value +define function ToString(value MedicationKnowledgeStatus): value.value +define function ToString(value MedicationRequestIntent): value.value +define function ToString(value MedicationRequestPriority): value.value +define function ToString(value MedicationRequestStatus): value.value +define function ToString(value MedicationStatementStatus): value.value +define function ToString(value MedicationStatus): value.value +define function ToString(value MessageSignificanceCategory): value.value +define function ToString(value Messageheader_Response_Request): value.value +define function ToString(value MimeType): value.value +define function ToString(value NameUse): value.value +define function ToString(value NamingSystemIdentifierType): value.value +define function ToString(value NamingSystemType): value.value +define function ToString(value NarrativeStatus): value.value +define function ToString(value NoteType): value.value +define function ToString(value NutritiionOrderIntent): value.value +define function ToString(value NutritionOrderStatus): value.value +define function ToString(value ObservationDataType): value.value +define function ToString(value ObservationRangeCategory): value.value +define function ToString(value ObservationStatus): value.value +define function ToString(value OperationKind): value.value +define function ToString(value OperationParameterUse): value.value +define function ToString(value OrientationType): value.value +define function ToString(value ParameterUse): value.value +define function ToString(value ParticipantRequired): value.value +define function ToString(value ParticipantStatus): value.value +define function ToString(value ParticipationStatus): value.value +define function ToString(value PaymentNoticeStatus): value.value +define function ToString(value PaymentReconciliationStatus): value.value +define function ToString(value ProcedureStatus): value.value +define function ToString(value PropertyRepresentation): value.value +define function ToString(value PropertyType): value.value +define function ToString(value ProvenanceEntityRole): value.value +define function ToString(value PublicationStatus): value.value +define function ToString(value QualityType): value.value +define function ToString(value QuantityComparator): value.value +define function ToString(value QuestionnaireItemOperator): value.value +define function ToString(value QuestionnaireItemType): value.value +define function ToString(value QuestionnaireResponseStatus): value.value +define function ToString(value ReferenceHandlingPolicy): value.value +define function ToString(value ReferenceVersionRules): value.value +define function ToString(value ReferredDocumentStatus): value.value +define function ToString(value RelatedArtifactType): value.value +define function ToString(value RemittanceOutcome): value.value +define function ToString(value RepositoryType): value.value +define function ToString(value RequestIntent): value.value +define function ToString(value RequestPriority): value.value +define function ToString(value RequestStatus): value.value +define function ToString(value ResearchElementType): value.value +define function ToString(value ResearchStudyStatus): value.value +define function ToString(value ResearchSubjectStatus): value.value +define function ToString(value ResourceType): value.value +define function ToString(value ResourceVersionPolicy): value.value +define function ToString(value ResponseType): value.value +define function ToString(value RestfulCapabilityMode): value.value +define function ToString(value RiskAssessmentStatus): value.value +define function ToString(value SPDXLicense): value.value +define function ToString(value SearchComparator): value.value +define function ToString(value SearchEntryMode): value.value +define function ToString(value SearchModifierCode): value.value +define function ToString(value SearchParamType): value.value +define function ToString(value SectionMode): value.value +define function ToString(value SequenceType): value.value +define function ToString(value ServiceRequestIntent): value.value +define function ToString(value ServiceRequestPriority): value.value +define function ToString(value ServiceRequestStatus): value.value +define function ToString(value SlicingRules): value.value +define function ToString(value SlotStatus): value.value +define function ToString(value SortDirection): value.value +define function ToString(value SpecimenContainedPreference): value.value +define function ToString(value SpecimenStatus): value.value +define function ToString(value Status): value.value +define function ToString(value StrandType): value.value +define function ToString(value StructureDefinitionKind): value.value +define function ToString(value StructureMapContextType): value.value +define function ToString(value StructureMapGroupTypeMode): value.value +define function ToString(value StructureMapInputMode): value.value +define function ToString(value StructureMapModelMode): value.value +define function ToString(value StructureMapSourceListMode): value.value +define function ToString(value StructureMapTargetListMode): value.value +define function ToString(value StructureMapTransform): value.value +define function ToString(value SubscriptionChannelType): value.value +define function ToString(value SubscriptionStatus): value.value +define function ToString(value SupplyDeliveryStatus): value.value +define function ToString(value SupplyRequestStatus): value.value +define function ToString(value SystemRestfulInteraction): value.value +define function ToString(value TaskIntent): value.value +define function ToString(value TaskPriority): value.value +define function ToString(value TaskStatus): value.value +define function ToString(value TestReportActionResult): value.value +define function ToString(value TestReportParticipantType): value.value +define function ToString(value TestReportResult): value.value +define function ToString(value TestReportStatus): value.value +define function ToString(value TestScriptRequestMethodCode): value.value +define function ToString(value TriggerType): value.value +define function ToString(value TypeDerivationRule): value.value +define function ToString(value TypeRestfulInteraction): value.value +define function ToString(value UDIEntryType): value.value +define function ToString(value UnitsOfTime): value.value +define function ToString(value Use): value.value +define function ToString(value VariableType): value.value +define function ToString(value VisionBase): value.value +define function ToString(value VisionEyes): value.value +define function ToString(value VisionStatus): value.value +define function ToString(value XPathUsageType): value.value +define function 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file mode 100644 index 00000000..32643d9d --- /dev/null +++ b/test-server/src/translate/models/system-modelinfo.xml @@ -0,0 +1,40 @@ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + \ No newline at end of file diff --git a/test-server/src/translate/require-polyfill.mts b/test-server/src/translate/require-polyfill.mts new file mode 100644 index 00000000..1d0ba1d6 --- /dev/null +++ b/test-server/src/translate/require-polyfill.mts @@ -0,0 +1,5 @@ +// This fixes https://github.com/Kotlin/kotlinx-io/issues/345 + +import { createRequire } from 'node:module'; +const require = createRequire(import.meta.url); +global.require = require; \ No newline at end of file diff --git a/test-server/src/translate/translate.ts b/test-server/src/translate/translate.ts new file mode 100644 index 00000000..c1681e50 --- /dev/null +++ b/test-server/src/translate/translate.ts @@ -0,0 +1,11 @@ +import { translateLibrary as translateLibraryService } from './translation-service'; +import { translateLibrary as translateLibraryModule } from './translation-module'; + +export async function translate(cql: string, useTranslationService = false): Promise { + const testLib = `library TestCQL version '1.0.0'\n\ncontext Unfiltered\n\ndefine expression: ${cql}`; + if (useTranslationService) { + return translateLibraryService(testLib); + } else { + return translateLibraryModule(testLib); + } +} diff --git a/test-server/src/translate/translation-module.ts b/test-server/src/translate/translation-module.ts new file mode 100644 index 00000000..de6e7c4d --- /dev/null +++ b/test-server/src/translate/translation-module.ts @@ -0,0 +1,49 @@ +// See: https://github.com/cqframework/clinical_quality_language/tree/main/Src/js/examples/cql2elm-nodejs + +import './require-polyfill.mjs'; +import * as path from 'path'; +import { NamespaceManager } from '@cqframework/cql/cql'; +import { + DefaultModelInfoProvider, + DefaultLibrarySourceProvider, + stringAsPath, + ModelManager, + LibraryManager, + CqlTranslator, + CqlCompilerOptions, + createUcumService +} from '@cqframework/cql/cql-to-elm'; + +// lazy initialization of libraryManager +let libraryManager: any = null; + +function getLibraryManager() { + if (libraryManager == null) { + const namespaceManager = new NamespaceManager(); + const modelManager = new ModelManager(namespaceManager); + modelManager.modelInfoLoader.registerModelInfoProvider( + new DefaultModelInfoProvider(stringAsPath(path.resolve(__dirname, 'models'))) + ); + // adjust the options to remove things we don't need and add things we do + const options = CqlCompilerOptions.defaultOptions(); + options.validateUnits = false; + const nestedOptions = options.options.asJsSetView() as Set; + nestedOptions.delete(CqlCompilerOptions.Options.valueOf('EnableAnnotations')); + nestedOptions.delete(CqlCompilerOptions.Options.valueOf('EnableLocators')); + nestedOptions.add(CqlCompilerOptions.Options.valueOf('EnableResultTypes')); + // the translator requires a UCUM service even if validation is off, so make a dummy one + const nf = () => null; + const ucumServiceJs = createUcumService(nf, nf, nf, nf); + // assign the module-scoped librarary manager + libraryManager = new LibraryManager(modelManager, options, null, ucumServiceJs); + libraryManager.librarySourceLoader.registerProvider( + new DefaultLibrarySourceProvider(stringAsPath(path.resolve(__dirname, './libraries'))) + ); + } + return libraryManager; +} + +export async function translateLibrary(cql: string): Promise { + const translator = CqlTranslator.fromText(cql, getLibraryManager()); + return JSON.parse(translator.toJson()); +} diff --git a/test-server/src/translate/translation-service.ts b/test-server/src/translate/translation-service.ts new file mode 100644 index 00000000..f26b572e --- /dev/null +++ b/test-server/src/translate/translation-service.ts @@ -0,0 +1,18 @@ +export async function translateLibrary(cql: string): Promise { + const upstream = await fetch('http://localhost:8080/cql/translator?result-types=true', { + method: 'POST', + headers: { + 'Content-Type': 'application/cql', + Accept: 'application/elm+json' + }, + body: cql + }); + + const contentType = upstream.headers.get('content-type') ?? ''; + if (contentType.includes('json')) { + return upstream.json(); + } else { + const text = await upstream.text(); + throw new Error(`Failed to translate. Received translation response: ${text}`); + } +} diff --git a/test-server/src/translate/types/cqframework-cql.d.ts b/test-server/src/translate/types/cqframework-cql.d.ts new file mode 100644 index 00000000..0bbb87ca --- /dev/null +++ b/test-server/src/translate/types/cqframework-cql.d.ts @@ -0,0 +1,14 @@ +declare module '@cqframework/cql/cql' { + export const NamespaceManager: any; +} + +declare module '@cqframework/cql/cql-to-elm' { + export const DefaultModelInfoProvider: any; + export const DefaultLibrarySourceProvider: any; + export const stringAsPath: any; + export const ModelManager: any; + export const LibraryManager: any; + export const CqlTranslator: any; + export const CqlCompilerOptions: any; + export function createUcumService(a: () => any, b: () => any, c: () => any, d: () => any): any; +} diff --git a/test-server/tests/convert/convert.test.ts b/test-server/tests/convert/convert.test.ts new file mode 100644 index 00000000..4f16fbae --- /dev/null +++ b/test-server/tests/convert/convert.test.ts @@ -0,0 +1,736 @@ +import { describe, it, expect, vi, MockInstance } from 'vitest'; +import { toParameters } from '@src/convert/convert'; +import { + ChoiceTypeSpecifier, + Code, + Concept, + Date as CqlDate, + DateTime, + Interval, + IntervalTypeSpecifier, + ListTypeSpecifier, + Quantity, + Ratio, + TupleTypeSpecifier +} from '../../..'; +import { Uncertainty } from '../../../lib/datatypes/uncertainty'; +import logger from '@src/logger'; + +function cqlTypeExt(type: string) { + return [{ url: 'http://hl7.org/fhir/StructureDefinition/cqf-cqlType', valueString: type }]; +} + +function timePrecisionExt(code: string) { + return { + extension: [{ url: 'http://hl7.org/fhir/StructureDefinition/time-precision', valueCode: code }] + }; +} + +describe('convert.toParameters', () => { + let logErrorSpy: MockInstance; + + beforeEach(() => { + logErrorSpy = vi.spyOn(logger, 'error').mockImplementation(() => {}); + }); + + describe('primitives', () => { + it('converts boolean to valueBoolean', () => { + expect(toParameters(true, 'System.Boolean')).toEqual({ + resourceType: 'Parameters', + parameter: [{ extension: cqlTypeExt('System.Boolean'), name: 'return', valueBoolean: true }] + }); + }); + + it('converts integer to valueInteger', () => { + expect(toParameters(42, 'System.Integer')).toEqual({ + resourceType: 'Parameters', + parameter: [{ extension: cqlTypeExt('System.Integer'), name: 'return', valueInteger: 42 }] + }); + }); + + it('converts long to valueString (R4)', () => { + expect(toParameters(1234567890123, 'System.Long')).toEqual({ + resourceType: 'Parameters', + parameter: [ + { extension: cqlTypeExt('System.Long'), name: 'return', valueString: '1234567890123' } + ] + }); + }); + + it('converts decimal to valueDecimal', () => { + expect(toParameters(3.14159, 'System.Decimal')).toEqual({ + resourceType: 'Parameters', + parameter: [ + { extension: cqlTypeExt('System.Decimal'), name: 'return', valueDecimal: 3.14159 } + ] + }); + }); + + it('converts string to valueString', () => { + expect(toParameters('hello world', 'System.String')).toEqual({ + resourceType: 'Parameters', + parameter: [ + { extension: cqlTypeExt('System.String'), name: 'return', valueString: 'hello world' } + ] + }); + }); + }); + + describe('Date / DateTime / Time', () => { + it('converts date to valueDate', () => { + const date = new CqlDate(2025, 1, 1); + expect(toParameters(date, 'System.Date')).toEqual({ + resourceType: 'Parameters', + parameter: [ + { extension: cqlTypeExt('System.Date'), name: 'return', valueDate: '2025-01-01' } + ] + }); + }); + + it('converts datetime (hour precision) to valueDateTime with precision extension', () => { + const dt = new DateTime(2025, 1, 1, 13); + expect(toParameters(dt, 'System.DateTime')).toEqual({ + resourceType: 'Parameters', + parameter: [ + { + extension: cqlTypeExt('System.DateTime'), + name: 'return', + valueDateTime: expect.stringMatching(/2025-01-01T13:00:00([+-]\d\d:\d\d|Z)/), + _valueDateTime: timePrecisionExt('h') + } + ] + }); + }); + + it('converts datetime (minute precision) to valueDateTime with precision extension', () => { + const dt = new DateTime(2025, 1, 1, 13, 27); + expect(toParameters(dt, 'System.DateTime')).toEqual({ + resourceType: 'Parameters', + parameter: [ + { + extension: cqlTypeExt('System.DateTime'), + name: 'return', + valueDateTime: expect.stringMatching(/2025-01-01T13:27:00([+-]\d\d:\d\d|Z)/), + _valueDateTime: timePrecisionExt('min') + } + ] + }); + }); + + it('converts datetime (second precision) to valueDateTime with precision extension', () => { + const dt = new DateTime(2025, 1, 1, 13, 27, 45); + expect(toParameters(dt, 'System.DateTime')).toEqual({ + resourceType: 'Parameters', + parameter: [ + { + extension: cqlTypeExt('System.DateTime'), + name: 'return', + valueDateTime: expect.stringMatching(/2025-01-01T13:27:45([+-]\d\d:\d\d|Z)/), + _valueDateTime: timePrecisionExt('s') + } + ] + }); + }); + + it('converts datetime (millisecond precision) to valueDateTime with precision extension', () => { + const dt = new DateTime(2025, 1, 1, 13, 27, 45, 123); + expect(toParameters(dt, 'System.DateTime')).toEqual({ + resourceType: 'Parameters', + parameter: [ + { + extension: cqlTypeExt('System.DateTime'), + name: 'return', + valueDateTime: expect.stringMatching(/2025-01-01T13:27:45.123([+-]\d\d:\d\d|Z)/), + _valueDateTime: timePrecisionExt('ms') + } + ] + }); + }); + + it('converts time to valueTime with precision extension', () => { + const time = new DateTime(2025, 1, 1, 8, 30).getTime(); + expect(toParameters(time, 'System.Time')).toEqual({ + resourceType: 'Parameters', + parameter: [ + { + extension: cqlTypeExt('System.Time'), + name: 'return', + valueTime: '08:30:00', + _valueTime: timePrecisionExt('min') + } + ] + }); + }); + + it('converts time (second precision) to valueTime with precision extension', () => { + const time = new DateTime(2025, 1, 1, 8, 30, 45).getTime(); + expect(toParameters(time, 'System.Time')).toEqual({ + resourceType: 'Parameters', + parameter: [ + { + extension: cqlTypeExt('System.Time'), + name: 'return', + valueTime: '08:30:45', + _valueTime: timePrecisionExt('s') + } + ] + }); + }); + + it('converts time (millisecond precision) to valueTime with precision extension', () => { + const time = new DateTime(2025, 1, 1, 8, 30, 45, 123).getTime(); + expect(toParameters(time, 'System.Time')).toEqual({ + resourceType: 'Parameters', + parameter: [ + { + extension: cqlTypeExt('System.Time'), + name: 'return', + valueTime: '08:30:45.123', + _valueTime: timePrecisionExt('ms') + } + ] + }); + }); + }); + + describe('Quantity / Ratio', () => { + it('converts CQL Quantity with UCUM to valueQuantity (length unit)', () => { + const q = new Quantity(1.5, 'cm'); + expect(toParameters(q, 'System.Quantity')).toEqual({ + resourceType: 'Parameters', + parameter: [ + { + extension: cqlTypeExt('System.Quantity'), + name: 'return', + valueQuantity: { + value: 1.5, + unit: 'cm', + code: 'cm', + system: 'http://unitsofmeasure.org' + } + } + ] + }); + }); + + it('converts CQL Quantity with calendar unit to valueQuantity (calendar-units system)', () => { + const q = new Quantity(2, 'day'); + expect(toParameters(q, 'System.Quantity')).toEqual({ + resourceType: 'Parameters', + parameter: [ + { + extension: cqlTypeExt('System.Quantity'), + name: 'return', + valueQuantity: { + value: 2, + unit: 'day', + code: 'day', + system: 'http://hl7.org/fhirpath/CodeSystem/calendar-units' + } + } + ] + }); + }); + + it('converts ratio to valueRatio with numerator/denominator quantities', () => { + const r = new Ratio(new Quantity(1, 'mg'), new Quantity(2, 'mL')); + expect(toParameters(r, 'System.Ratio')).toEqual({ + resourceType: 'Parameters', + parameter: [ + { + extension: cqlTypeExt('System.Ratio'), + name: 'return', + valueRatio: { + numerator: { value: 1, unit: 'mg', code: 'mg', system: 'http://unitsofmeasure.org' }, + denominator: { value: 2, unit: 'mL', code: 'mL', system: 'http://unitsofmeasure.org' } + } + } + ] + }); + }); + }); + + describe('Code / Concept', () => { + it('converts code to valueCoding (system/version/display)', () => { + const code = new Code('8480-6', 'http://loinc.org', '2.67', 'Systolic blood pressure'); + expect(toParameters(code, 'System.Code')).toEqual({ + resourceType: 'Parameters', + parameter: [ + { + extension: cqlTypeExt('System.Code'), + name: 'return', + valueCoding: { + code: '8480-6', + system: 'http://loinc.org', + version: '2.67', + display: 'Systolic blood pressure' + } + } + ] + }); + }); + + it('converts concept to valueCodeableConcept (multiple codings and text)', () => { + const concept = new Concept( + [new Code('8480-6', 'http://loinc.org'), new Code('1234-5', 'http://loinc.org')], + 'Blood Pressure' + ); + expect(toParameters(concept, 'System.Concept')).toEqual({ + resourceType: 'Parameters', + parameter: [ + { + extension: cqlTypeExt('System.Concept'), + name: 'return', + valueCodeableConcept: { + coding: [ + { code: '8480-6', system: 'http://loinc.org' }, + { code: '1234-5', system: 'http://loinc.org' } + ], + text: 'Blood Pressure' + } + } + ] + }); + }); + }); + + describe('List', () => { + it('converts non-empty List to multiple return parameters', () => { + const typeSpec = { + type: 'ListTypeSpecifier', + elementType: { type: 'NamedTypeSpecifier', name: '{urn:hl7-org:elm-types:r1}Integer' } + } as ListTypeSpecifier; + expect(toParameters([1, 2, 3], typeSpec)).toEqual({ + resourceType: 'Parameters', + parameter: [ + { extension: cqlTypeExt('List'), name: 'return', valueInteger: 1 }, + { extension: cqlTypeExt('List'), name: 'return', valueInteger: 2 }, + { extension: cqlTypeExt('List'), name: 'return', valueInteger: 3 } + ] + }); + }); + + it('converts List> using nested list parts', () => { + const typeSpec = { + type: 'ListTypeSpecifier', + elementType: { + type: 'ListTypeSpecifier', + elementType: { type: 'NamedTypeSpecifier', name: '{urn:hl7-org:elm-types:r1}String' } + } + } as ListTypeSpecifier; + expect(toParameters([['a', 'b'], []], typeSpec)).toEqual({ + resourceType: 'Parameters', + parameter: [ + { + extension: cqlTypeExt('List>'), + name: 'return', + part: [ + { name: 'element', valueString: 'a' }, + { name: 'element', valueString: 'b' } + ] + }, + { + extension: cqlTypeExt('List>'), + name: 'return', + part: [ + { + name: 'element', + _valueBoolean: { + extension: [ + { + url: 'http://hl7.org/fhir/StructureDefinition/cqf-isEmptyList', + valueBoolean: true + } + ] + } + } + ] + } + ] + }); + }); + + it('converts empty List to emptyList parameter', () => { + const typeSpec = { + type: 'ListTypeSpecifier', + elementType: { type: 'NamedTypeSpecifier', name: '{urn:hl7-org:elm-types:r1}String' } + } as ListTypeSpecifier; + expect(toParameters([], typeSpec)).toEqual({ + resourceType: 'Parameters', + parameter: [ + { + extension: cqlTypeExt('List'), + name: 'return', + _valueBoolean: { + extension: [ + { + url: 'http://hl7.org/fhir/StructureDefinition/cqf-isEmptyList', + valueBoolean: true + } + ] + } + } + ] + }); + }); + }); + + describe('Interval', () => { + it('maps Interval to Period with start/end', () => { + const typeSpec = { + type: 'IntervalTypeSpecifier', + pointType: { type: 'NamedTypeSpecifier', name: '{urn:hl7-org:elm-types:r1}Date' } + } as IntervalTypeSpecifier; + expect( + toParameters(new Interval(new CqlDate(2025, 1, 1), new CqlDate(2025, 1, 31)), typeSpec) + ).toEqual({ + resourceType: 'Parameters', + parameter: [ + { + extension: cqlTypeExt('Interval'), + name: 'return', + valuePeriod: { + start: '2025-01-01', + _start: timePrecisionExt('d'), + end: '2025-01-31', + _end: timePrecisionExt('d') + } + } + ] + }); + }); + + it('maps Interval with open boundary to Period with start/end', () => { + const typeSpec = { + type: 'IntervalTypeSpecifier', + pointType: { type: 'NamedTypeSpecifier', name: '{urn:hl7-org:elm-types:r1}Date' } + } as IntervalTypeSpecifier; + expect( + toParameters( + new Interval(new CqlDate(2025, 1, 1), new CqlDate(2025, 1, 31), true, false), + typeSpec + ) + ).toEqual({ + resourceType: 'Parameters', + parameter: [ + { + extension: cqlTypeExt('Interval'), + name: 'return', + valuePeriod: { + start: '2025-01-01', + _start: timePrecisionExt('d'), + end: '2025-01-30', + _end: timePrecisionExt('d') + } + } + ] + }); + }); + + it('maps Interval to Period with start/end and precision extensions', () => { + const typeSpec = { + type: 'IntervalTypeSpecifier', + pointType: { type: 'NamedTypeSpecifier', name: '{urn:hl7-org:elm-types:r1}DateTime' } + } as IntervalTypeSpecifier; + const low = new DateTime(2025, 1, 1, 9); + const high = new DateTime(2025, 1, 2); + expect(toParameters(new Interval(low, high), typeSpec)).toEqual({ + resourceType: 'Parameters', + parameter: [ + { + extension: cqlTypeExt('Interval'), + name: 'return', + valuePeriod: { + start: expect.stringMatching(/2025-01-01T09:00:00([+-]\d\d:\d\d|Z)/), + _start: timePrecisionExt('h'), + end: '2025-01-02', + _end: timePrecisionExt('d') + } + } + ] + }); + }); + + it('maps Interval with open boundary to Period with start/end and precision extensions', () => { + const typeSpec = { + type: 'IntervalTypeSpecifier', + pointType: { type: 'NamedTypeSpecifier', name: '{urn:hl7-org:elm-types:r1}DateTime' } + } as IntervalTypeSpecifier; + const low = new DateTime(2025, 1, 1, 9); + const high = new DateTime(2025, 1, 2); + expect(toParameters(new Interval(low, high, false, true), typeSpec)).toEqual({ + resourceType: 'Parameters', + parameter: [ + { + extension: cqlTypeExt('Interval'), + name: 'return', + valuePeriod: { + start: expect.stringMatching(/2025-01-01T10:00:00([+-]\d\d:\d\d|Z)/), + _start: timePrecisionExt('h'), + end: '2025-01-02', + _end: timePrecisionExt('d') + } + } + ] + }); + }); + + it('maps Interval with missing high boundary to Period with no end', () => { + const typeSpec = { + type: 'IntervalTypeSpecifier', + pointType: { type: 'NamedTypeSpecifier', name: '{urn:hl7-org:elm-types:r1}DateTime' } + } as IntervalTypeSpecifier; + const low = new DateTime(2025, 1, 1, 9); + expect(toParameters(new Interval(low, null), typeSpec)).toEqual({ + resourceType: 'Parameters', + parameter: [ + { + extension: cqlTypeExt('Interval'), + name: 'return', + valuePeriod: { + start: expect.stringMatching(/2025-01-01T09:00:00([+-]\d\d:\d\d|Z)/), + _start: timePrecisionExt('h') + } + } + ] + }); + }); + + it('maps Interval with missing low boundary to Period without start', () => { + const typeSpec = { + type: 'IntervalTypeSpecifier', + pointType: { type: 'NamedTypeSpecifier', name: '{urn:hl7-org:elm-types:r1}DateTime' } + } as IntervalTypeSpecifier; + const high = new DateTime(2025, 1, 2); + expect(toParameters(new Interval(null, high), typeSpec)).toEqual({ + resourceType: 'Parameters', + parameter: [ + { + extension: cqlTypeExt('Interval'), + name: 'return', + valuePeriod: { + end: '2025-01-02', + _end: timePrecisionExt('d') + } + } + ] + }); + }); + + it('maps Interval to Range with low/high quantities', () => { + const typeSpec = { + type: 'IntervalTypeSpecifier', + pointType: { type: 'NamedTypeSpecifier', name: '{urn:hl7-org:elm-types:r1}Quantity' } + } as IntervalTypeSpecifier; + const low = new Quantity(120, 'mm[Hg]'); + const high = new Quantity(140, 'mm[Hg]'); + expect(toParameters(new Interval(low, high), typeSpec)).toEqual({ + resourceType: 'Parameters', + parameter: [ + { + extension: cqlTypeExt('Interval'), + name: 'return', + valueRange: { + low: { + value: 120, + unit: 'mm[Hg]', + code: 'mm[Hg]', + system: 'http://unitsofmeasure.org' + }, + high: { + value: 140, + unit: 'mm[Hg]', + code: 'mm[Hg]', + system: 'http://unitsofmeasure.org' + } + } + } + ] + }); + }); + + it('maps Interval to tuple parts (low/lowClosed/high/highClosed)', () => { + const typeSpec = { + type: 'IntervalTypeSpecifier', + pointType: { type: 'NamedTypeSpecifier', name: '{urn:hl7-org:elm-types:r1}Integer' } + } as IntervalTypeSpecifier; + expect(toParameters(new Interval(1, 5, false, true), typeSpec)).toEqual({ + resourceType: 'Parameters', + parameter: [ + { + extension: cqlTypeExt('Interval'), + name: 'return', + part: [ + { name: 'low', valueInteger: 1 }, + { name: 'lowClosed', valueBoolean: false }, + { name: 'high', valueInteger: 5 }, + { name: 'highClosed', valueBoolean: true } + ] + } + ] + }); + }); + }); + + describe('Tuple', () => { + it('converts non-empty Tuple to parts', () => { + const typeSpec = { + type: 'TupleTypeSpecifier', + element: [ + { + name: 'a', + elementType: { type: 'NamedTypeSpecifier', name: '{urn:hl7-org:elm-types:r1}Integer' } + }, + { + name: 'b', + elementType: { type: 'NamedTypeSpecifier', name: '{urn:hl7-org:elm-types:r1}String' } + } + ] + } as TupleTypeSpecifier; + expect(toParameters({ a: 10, b: 'x' }, typeSpec)).toEqual({ + resourceType: 'Parameters', + parameter: [ + { + extension: cqlTypeExt('Tuple'), + name: 'return', + part: [ + { name: 'a', valueInteger: 10 }, + { name: 'b', valueString: 'x' } + ] + } + ] + }); + }); + + it('converts empty object to emptyTuple parameter', () => { + const typeSpec = { + type: 'TupleTypeSpecifier', + element: [ + { + name: 'a', + elementType: { type: 'NamedTypeSpecifier', name: '{urn:hl7-org:elm-types:r1}Integer' } + } + ] + } as TupleTypeSpecifier; + expect(toParameters({}, typeSpec)).toEqual({ + resourceType: 'Parameters', + parameter: [ + { + extension: cqlTypeExt('Tuple'), + name: 'return', + _valueBoolean: { + extension: [ + { + url: 'http://hl7.org/fhir/StructureDefinition/cqf-isEmptyTuple', + valueBoolean: true + } + ] + } + } + ] + }); + }); + }); + + describe('Any / Choice / Missing Types', () => { + it('guesses type for System.Any and converts value (Code example)', () => { + expect(toParameters(new Code('123', 'http://example.org'), 'System.Any')).toEqual({ + resourceType: 'Parameters', + parameter: [ + { + extension: cqlTypeExt('System.Any'), + name: 'return', + valueCoding: { code: '123', system: 'http://example.org' } + } + ] + }); + }); + + it('returns name-only parameter for unsupported Choice Type', () => { + const typeSpec = { + type: 'ChoiceTypeSpecifier', + choice: [ + { type: 'NamedTypeSpecifier', name: '{urn:hl7-org:elm-types:r1}String' }, + { type: 'NamedTypeSpecifier', name: '{urn:hl7-org:elm-types:r1}Integer' } + ] + } as ChoiceTypeSpecifier; + expect(toParameters('foo', typeSpec)).toEqual({ + resourceType: 'Parameters', + parameter: [ + { + extension: cqlTypeExt('Choice'), + name: 'return' + } + ] + }); + expect(logErrorSpy).toHaveBeenCalledWith( + 'CHOICETYPE NOT SUPPORTED', + 'Choice' + ); + }); + + it('guesses type when no type is passed in and converts value (Decimal example)', () => { + expect(toParameters(1.25)).toEqual({ + resourceType: 'Parameters', + parameter: [ + { + extension: cqlTypeExt('System.Decimal'), + name: 'return', + valueDecimal: 1.25 + } + ] + }); + }); + }); + + describe('Uncertainty', () => { + it('collapses uncertainty with equal low/high to point value', () => { + const u = new Uncertainty(2.5, 2.5); + expect(toParameters(u, 'System.Decimal')).toEqual({ + resourceType: 'Parameters', + parameter: [{ extension: cqlTypeExt('System.Decimal'), name: 'return', valueDecimal: 2.5 }] + }); + }); + + it('maps uncertainty with unequal low/high to an Interval tuple', () => { + const u = new Uncertainty(1, 5); + expect(toParameters(u, 'System.Integer')).toEqual({ + resourceType: 'Parameters', + parameter: [ + { + extension: cqlTypeExt('System.Integer'), + name: 'return', + part: [ + { name: 'low', valueInteger: 1 }, + { name: 'lowClosed', valueBoolean: true }, + { name: 'high', valueInteger: 5 }, + { name: 'highClosed', valueBoolean: true } + ] + } + ] + }); + }); + }); + + describe('Null', () => { + it('converts null result to null boolean parameter with data-absent-reason extension', () => { + expect(toParameters(null, 'System.String')).toEqual({ + resourceType: 'Parameters', + parameter: [ + { + extension: cqlTypeExt('System.String'), + name: 'return', + _valueBoolean: { + extension: [ + { + url: 'http://hl7.org/fhir/StructureDefinition/data-absent-reason', + valueCode: 'unknown' + } + ] + } + } + ] + }); + }); + }); +}); diff --git a/test-server/tests/convert/cqlTypes.test.ts b/test-server/tests/convert/cqlTypes.test.ts new file mode 100644 index 00000000..5c8ec76d --- /dev/null +++ b/test-server/tests/convert/cqlTypes.test.ts @@ -0,0 +1,235 @@ +import { describe, it, expect } from 'vitest'; +import { + typeToCqlTypeSpecifier, + typeToCqlTypeString, + guessSpecifierType +} from '@src/convert/cqlTypes'; +import { + AnyTypeSpecifier, + ChoiceTypeSpecifier, + Code, + Concept, + Date as CqlDate, + DateTime, + Interval, + IntervalTypeSpecifier, + ListTypeSpecifier, + NamedTypeSpecifier, + Quantity, + RecordObject, + TupleTypeSpecifier +} from '../../..'; +import { Uncertainty } from '../../../lib/datatypes/uncertainty'; + +describe('typeToCqlTypeSpecifier', () => { + it('converts System.* string to NamedTypeSpecifier with ELM namespace', () => { + const spec = typeToCqlTypeSpecifier('System.Boolean'); + expect(spec).toEqual({ + type: 'NamedTypeSpecifier', + name: '{urn:hl7-org:elm-types:r1}Boolean' + } as NamedTypeSpecifier); + }); + + it('passes through an existing TypeSpecifier unchanged', () => { + const existing = { + type: 'ListTypeSpecifier', + elementType: { type: 'NamedTypeSpecifier', name: '{urn:hl7-org:elm-types:r1}String' } + } as ListTypeSpecifier; + const spec = typeToCqlTypeSpecifier(existing); + expect(spec).toBe(existing); + }); +}); + +describe('typeToCqlTypeString', () => { + it('returns System.Any for nullish or missing type', () => { + expect(typeToCqlTypeString(null as unknown as AnyTypeSpecifier)).toBe('System.Any'); + expect(typeToCqlTypeString({} as AnyTypeSpecifier)).toBe('System.Any'); + }); + + it('converts ELM-namespaced string to System.*', () => { + expect(typeToCqlTypeString('{urn:hl7-org:elm-types:r1}String')).toBe('System.String'); + }); + + it('converts NamedTypeSpecifier', () => { + const spec = { + type: 'NamedTypeSpecifier', + name: '{urn:hl7-org:elm-types:r1}Integer' + } as NamedTypeSpecifier; + expect(typeToCqlTypeString(spec)).toBe('System.Integer'); + }); + + it('converts ListTypeSpecifier recursively', () => { + const spec = { + type: 'ListTypeSpecifier', + elementType: { type: 'NamedTypeSpecifier', name: '{urn:hl7-org:elm-types:r1}Boolean' } + } as ListTypeSpecifier; + expect(typeToCqlTypeString(spec)).toBe('List'); + }); + + it('converts TupleTypeSpecifier with named elements', () => { + const spec = { + type: 'TupleTypeSpecifier', + element: [ + { + name: 'a', + elementType: { type: 'NamedTypeSpecifier', name: '{urn:hl7-org:elm-types:r1}Integer' } + }, + { + name: 'b', + elementType: { type: 'NamedTypeSpecifier', name: '{urn:hl7-org:elm-types:r1}String' } + } + ] + } as TupleTypeSpecifier; + expect(typeToCqlTypeString(spec)).toBe('Tuple'); + }); + + it('converts IntervalTypeSpecifier', () => { + const spec = { + type: 'IntervalTypeSpecifier', + pointType: { type: 'NamedTypeSpecifier', name: '{urn:hl7-org:elm-types:r1}Decimal' } + } as IntervalTypeSpecifier; + expect(typeToCqlTypeString(spec)).toBe('Interval'); + }); + + it('formats ChoiceTypeSpecifier', () => { + const spec = { + type: 'ChoiceTypeSpecifier', + choice: [ + { type: 'NamedTypeSpecifier', name: '{urn:hl7-org:elm-types:r1}String' }, + { type: 'NamedTypeSpecifier', name: '{urn:hl7-org:elm-types:r1}Integer' } + ] + } as ChoiceTypeSpecifier; + expect(typeToCqlTypeString(spec)).toBe('Choice'); + }); + + it('stringifies unknown specifier types', () => { + const spec = { type: 'UnknownTypeSpecifier', foo: 1 }; + expect(typeToCqlTypeString(spec as AnyTypeSpecifier)).toBe(JSON.stringify(spec)); + }); +}); + +describe('guessSpecifierType', () => { + it('returns undefined for nullish input', () => { + expect(guessSpecifierType(null)).toBeUndefined(); + expect(guessSpecifierType(undefined)).toBeUndefined(); + }); + + it('uses _typeHierarchy when provided', () => { + const obj = { + hello: 'world', + _typeHierarchy: () => [ + { type: 'NamedTypeSpecifier', name: '{urn:example:project}Greeting' }, + { type: 'NamedTypeSpecifier', name: '{urn:example:project}Message' } + ] + } as Partial; + expect(guessSpecifierType(obj)).toEqual({ + type: 'NamedTypeSpecifier', + name: '{urn:example:project}Greeting' + }); + }); + + it('detects primitives and standard CQL datatypes', () => { + expect(guessSpecifierType(true)).toEqual({ + type: 'NamedTypeSpecifier', + name: '{urn:hl7-org:elm-types:r1}Boolean' + } as NamedTypeSpecifier); + expect(guessSpecifierType(3)).toEqual({ + type: 'NamedTypeSpecifier', + name: '{urn:hl7-org:elm-types:r1}Integer' + } as NamedTypeSpecifier); + expect(guessSpecifierType(3.14)).toEqual({ + type: 'NamedTypeSpecifier', + name: '{urn:hl7-org:elm-types:r1}Decimal' + } as NamedTypeSpecifier); + expect(guessSpecifierType('hello')).toEqual({ + type: 'NamedTypeSpecifier', + name: '{urn:hl7-org:elm-types:r1}String' + } as NamedTypeSpecifier); + const concept = new Concept([new Code('foo')]); + expect(guessSpecifierType(concept)).toEqual({ + type: 'NamedTypeSpecifier', + name: '{urn:hl7-org:elm-types:r1}Concept' + } as NamedTypeSpecifier); + const code = new Code('foo'); + expect(guessSpecifierType(code)).toEqual({ + type: 'NamedTypeSpecifier', + name: '{urn:hl7-org:elm-types:r1}Code' + } as NamedTypeSpecifier); + const quantity = new Quantity(1.5, 'cm'); + expect(guessSpecifierType(quantity)).toEqual({ + type: 'NamedTypeSpecifier', + name: '{urn:hl7-org:elm-types:r1}Quantity' + } as NamedTypeSpecifier); + const date = new CqlDate(2025, 1, 1); + expect(guessSpecifierType(date)).toEqual({ + type: 'NamedTypeSpecifier', + name: '{urn:hl7-org:elm-types:r1}Date' + } as NamedTypeSpecifier); + const dateTime = new DateTime(2025, 1, 1, 12, 0, 0, 0, 0); + expect(guessSpecifierType(dateTime)).toEqual({ + type: 'NamedTypeSpecifier', + name: '{urn:hl7-org:elm-types:r1}DateTime' + } as NamedTypeSpecifier); + const time = new DateTime(2025, 1, 1, 12, 0, 0, 0, 0).getTime(); + expect(guessSpecifierType(time)).toEqual({ + type: 'NamedTypeSpecifier', + name: '{urn:hl7-org:elm-types:r1}Time' + } as NamedTypeSpecifier); + }); + + it('returns the correct type for Uncertainty values', () => { + const spec = guessSpecifierType(new Uncertainty(1.5, 2.5))!; + expect(spec).toEqual({ + type: 'NamedTypeSpecifier', + name: '{urn:hl7-org:elm-types:r1}Decimal' + } as NamedTypeSpecifier); + }); + + it('returns ListTypeSpecifier for arrays with consistent type', () => { + const spec = guessSpecifierType([1, 2, 3])!; + expect(spec).toEqual({ + type: 'ListTypeSpecifier', + elementType: { type: 'NamedTypeSpecifier', name: '{urn:hl7-org:elm-types:r1}Integer' } + } as ListTypeSpecifier); + }); + + it('returns ListTypeSpecifier with Choice for arrays with mixed types', () => { + const spec = guessSpecifierType([1, 2.5, true])!; + expect(spec).toEqual({ + type: 'ListTypeSpecifier', + elementType: { + type: 'ChoiceTypeSpecifier', + choice: [ + { type: 'NamedTypeSpecifier', name: '{urn:hl7-org:elm-types:r1}Integer' }, + { type: 'NamedTypeSpecifier', name: '{urn:hl7-org:elm-types:r1}Decimal' }, + { type: 'NamedTypeSpecifier', name: '{urn:hl7-org:elm-types:r1}Boolean' } + ] + } + } as ListTypeSpecifier); + }); + + it('returns IntervalTypeSpecifier with correct point type', () => { + const spec = guessSpecifierType(new Interval(1, 5))!; + expect(spec).toEqual({ + type: 'IntervalTypeSpecifier', + pointType: { type: 'NamedTypeSpecifier', name: '{urn:hl7-org:elm-types:r1}Integer' } + } as IntervalTypeSpecifier); + }); + + it('returns TupleTypeSpecifier with correct element types for plain objects', () => { + const spec = guessSpecifierType({ a: 1, b: 'x' })!; + expect(spec).toEqual({ + type: 'TupleTypeSpecifier', + element: [ + { + name: 'a', + elementType: { type: 'NamedTypeSpecifier', name: '{urn:hl7-org:elm-types:r1}Integer' } + }, + { + name: 'b', + elementType: { type: 'NamedTypeSpecifier', name: '{urn:hl7-org:elm-types:r1}String' } + } + ] + } as TupleTypeSpecifier); + }); +}); diff --git a/test-server/tests/convert/specialParameters.test.ts b/test-server/tests/convert/specialParameters.test.ts new file mode 100644 index 00000000..986adb86 --- /dev/null +++ b/test-server/tests/convert/specialParameters.test.ts @@ -0,0 +1,53 @@ +import { describe, it, expect } from 'vitest'; +import { + emptyListParameter, + emptyTupleParameter, + nullValueParameter +} from '@src/convert/specialParameters'; + +describe('specialParameters', () => { + it('emptyListParameter constructs expected FHIR extension', () => { + const result = emptyListParameter('MyList'); + expect(result).toEqual({ + name: 'MyList', + _valueBoolean: { + extension: [ + { + url: 'http://hl7.org/fhir/StructureDefinition/cqf-isEmptyList', + valueBoolean: true + } + ] + } + }); + }); + + it('emptyTupleParameter constructs expected FHIR extension', () => { + const result = emptyTupleParameter('MyTuple'); + expect(result).toEqual({ + name: 'MyTuple', + _valueBoolean: { + extension: [ + { + url: 'http://hl7.org/fhir/StructureDefinition/cqf-isEmptyTuple', + valueBoolean: true + } + ] + } + }); + }); + + it('nullValueParameter constructs expected data-absent-reason extension', () => { + const result = nullValueParameter('MyNull'); + expect(result).toEqual({ + name: 'MyNull', + _valueBoolean: { + extension: [ + { + url: 'http://hl7.org/fhir/StructureDefinition/data-absent-reason', + valueCode: 'unknown' + } + ] + } + }); + }); +}); diff --git a/test-server/tests/operation/operation.test.ts b/test-server/tests/operation/operation.test.ts new file mode 100644 index 00000000..231a848d --- /dev/null +++ b/test-server/tests/operation/operation.test.ts @@ -0,0 +1,61 @@ +import { describe, it, expect, vi, beforeEach, afterEach, MockInstance } from 'vitest'; +import { $cql } from '@src/operation'; +import * as translateModule from '@src/translate'; +import * as convertModule from '@src/convert'; +import { Parameters } from 'fhir/r4'; +import logger from '@src/logger'; + +describe('operation.$cql', () => { + let translateSpy: MockInstance; + let toParametersSpy: MockInstance; + + const elm = { + library: { + identifier: { id: 'LocalTest', version: '1.0.0' }, + usings: { + def: [{ localIdentifier: 'System', uri: 'urn:hl7-org:elm-types:r1', annotation: [] }] + }, + contexts: { def: [{ name: 'Unfiltered', annotation: [] }] }, + statements: { + def: [ + { + resultTypeName: '{urn:hl7-org:elm-types:r1}Integer', + name: 'expression', + context: 'Unfiltered', + accessLevel: 'Public', + expression: { + type: 'Add', + operand: [ + { type: 'Literal', valueType: '{urn:hl7-org:elm-types:r1}Integer', value: '1' }, + { type: 'Literal', valueType: '{urn:hl7-org:elm-types:r1}Integer', value: '2' } + ] + } + } + ] + } + } + }; + + const parameters = { + resourceType: 'Parameters', + parameter: [{ name: 'return', valueInteger: 3 }] + } as Parameters; + + beforeEach(() => { + vi.spyOn(logger, 'debug').mockImplementation(() => {}); // suppress logs + translateSpy = vi.spyOn(translateModule, 'translate').mockResolvedValue(elm); + toParametersSpy = vi.spyOn(convertModule, 'toParameters').mockReturnValue(parameters); + }); + + afterEach(() => { + vi.restoreAllMocks(); + }); + + it('translates, executes, and converts the result to FHIR Parameters', async () => { + const result = await $cql('1 + 2'); + + expect(translateSpy).toHaveBeenCalledWith('1 + 2', expect.toBeOneOf([true, false])); + expect(toParametersSpy).toHaveBeenCalledWith(3, '{urn:hl7-org:elm-types:r1}Integer'); + expect(result).toBe(parameters); + }); +}); diff --git a/test-server/tests/translate/translate.test.ts b/test-server/tests/translate/translate.test.ts new file mode 100644 index 00000000..81369e2b --- /dev/null +++ b/test-server/tests/translate/translate.test.ts @@ -0,0 +1,54 @@ +import { describe, it, expect, beforeEach, vi, MockInstance } from 'vitest'; +import { translate } from '@src/translate/translate'; +import * as translationModule from '@src/translate/translation-module'; +import * as translationService from '@src/translate/translation-service'; + +describe('translate', () => { + // mock out the underlying translation modules, as they'll be tested independently + let moduleSpy: MockInstance; + let serviceSpy: MockInstance; + + beforeEach(() => { + moduleSpy = vi.spyOn(translationModule, 'translateLibrary').mockResolvedValue({ + mocked: true, + library: { identifier: { id: 'TestCQL', version: '1.0.0' } } + }); + + serviceSpy = vi.spyOn(translationService, 'translateLibrary').mockResolvedValue({ + mocked: true, + library: { identifier: { id: 'TestCQL', version: '1.0.0' } } + }); + }); + + afterEach(() => { + vi.restoreAllMocks(); + }); + + it('uses the local translation module by default and returns correct identifier', async () => { + const elm = await translate('1 + 2'); + + expect(moduleSpy).toHaveBeenCalledTimes(1); + const passedCQL = moduleSpy.mock.calls[0]?.[0]; + expect(passedCQL).toContain("library TestCQL version '1.0.0'"); + expect(passedCQL).toContain('context Unfiltered'); + expect(passedCQL).toContain('define expression: 1 + 2'); + expect(elm).toEqual({ + mocked: true, + library: { identifier: { id: 'TestCQL', version: '1.0.0' } } + }); + }); + + it('uses the translation service when flag is true', async () => { + const elm = await translate('1 + 2', true); + + expect(serviceSpy).toHaveBeenCalledTimes(1); + const passedCQL = serviceSpy.mock.calls[0]?.[0]; + expect(passedCQL).toContain("library TestCQL version '1.0.0'"); + expect(passedCQL).toContain('context Unfiltered'); + expect(passedCQL).toContain('define expression: 1 + 2'); + expect(elm).toEqual({ + mocked: true, + library: { identifier: { id: 'TestCQL', version: '1.0.0' } } + }); + }); +}); diff --git a/test-server/tests/translate/translation-module.test.ts b/test-server/tests/translate/translation-module.test.ts new file mode 100644 index 00000000..b2eb0830 --- /dev/null +++ b/test-server/tests/translate/translation-module.test.ts @@ -0,0 +1,49 @@ +import { describe, it, expect } from 'vitest'; +import { translateLibrary } from '@src/translate/translation-module'; + +describe('translation-module.translateLibrary (integration)', () => { + it('returns ELM JSON with correct translation for a simple library', async () => { + const cql = [ + "library LocalTest version '1.0.0'", + 'context Unfiltered', + 'define expression: 1 + 2' + ].join('\n'); + + const elm = await translateLibrary(cql); + + // Just check that the most important properties are there since doing a full object match may + // be brittle as the translation NPM module is updated. + expect(elm).toMatchObject({ + library: { + identifier: { + id: 'LocalTest', + version: '1.0.0' + }, + statements: { + def: [ + { + resultTypeName: '{urn:hl7-org:elm-types:r1}Integer', + name: 'expression', + context: 'Unfiltered', + expression: { + type: 'Add', + operand: [ + { + type: 'Literal', + valueType: '{urn:hl7-org:elm-types:r1}Integer', + value: '1' + }, + { + type: 'Literal', + valueType: '{urn:hl7-org:elm-types:r1}Integer', + value: '2' + } + ] + } + } + ] + } + } + }); + }); +}); diff --git a/test-server/tests/translate/translation-service.test.ts b/test-server/tests/translate/translation-service.test.ts new file mode 100644 index 00000000..5f153d65 --- /dev/null +++ b/test-server/tests/translate/translation-service.test.ts @@ -0,0 +1,61 @@ +import { describe, it, expect, afterEach, vi, MockInstance } from 'vitest'; +import { translateLibrary } from '@src/translate/translation-service'; + +describe('translation-service.translateLibrary', () => { + const url = 'http://localhost:8080/cql/translator?result-types=true'; + const cql = "library Foo version '1.0.0'"; + + let mockFetch: MockInstance; + + beforeEach(() => { + mockFetch = vi.fn(); + vi.stubGlobal('fetch', mockFetch); + }); + + afterEach(() => { + vi.unstubAllGlobals(); + vi.restoreAllMocks(); + }); + + it('returns parsed JSON when content-type is json', async () => { + const jsonPayload = { elm: { library: { identifier: { id: 'Foo', version: '1.0.0' } } } }; + mockFetch.mockResolvedValue({ + headers: { + get: (k: string) => + k.toLowerCase() === 'content-type' ? 'application/elm+json; charset=utf-8' : null + }, + json: vi.fn().mockResolvedValue(jsonPayload), + text: vi.fn() + }); + + const elm = await translateLibrary(cql); + + expect(elm).toEqual(jsonPayload); + expect(mockFetch).toHaveBeenCalledTimes(1); + + const [calledUrl, init] = mockFetch.mock.calls[0] as [string, any]; + expect(calledUrl).toBe(url); + expect(init.method).toBe('POST'); + expect(init.headers).toMatchObject({ + 'Content-Type': 'application/cql', + Accept: 'application/elm+json' + }); + expect(init.body).toBe(cql); + }); + + it('throws with response text when content-type is not json', async () => { + const errorText = 'Translator error details'; + + mockFetch.mockResolvedValue({ + headers: { + get: (k: string) => (k.toLowerCase() === 'content-type' ? 'text/plain' : null) + }, + json: vi.fn(), + text: vi.fn().mockResolvedValue(errorText) + }); + + await expect(translateLibrary(cql)).rejects.toThrow( + `Failed to translate. Received translation response: ${errorText}` + ); + }); +}); diff --git a/test-server/tests/tsconfig.json b/test-server/tests/tsconfig.json new file mode 100644 index 00000000..df79f446 --- /dev/null +++ b/test-server/tests/tsconfig.json @@ -0,0 +1,13 @@ +{ + "extends": "../tsconfig", + "compilerOptions": { + "rootDir": "..", + "types": ["vitest/globals"], + "noEmit": true, + "paths": { + "@src/*": ["../src/*"] + } + }, + "include": ["**/*.ts"], + "exclude": [] +} diff --git a/test-server/tsconfig.json b/test-server/tsconfig.json new file mode 100644 index 00000000..7d25805f --- /dev/null +++ b/test-server/tsconfig.json @@ -0,0 +1,49 @@ +{ + // Visit https://aka.ms/tsconfig to read more about this file + "compilerOptions": { + // File Layout + "rootDir": "./src", + "outDir": "./dist", + + // Environment Settings + // See also https://aka.ms/tsconfig/module + "module": "nodenext", + "target": "esnext", + "moduleResolution": "nodenext", + "types": ["node"], + "lib": ["esnext"], + "esModuleInterop": true, + "allowSyntheticDefaultImports": true, + // For nodejs: + // and npm install -D @types/node + + // Other Outputs + "sourceMap": true, + "declaration": true, + "declarationMap": true, + + // Stricter Typechecking Options + "noUncheckedIndexedAccess": true, + "exactOptionalPropertyTypes": true, + + // Style Options + // "noImplicitReturns": true, + // "noImplicitOverride": true, + // "noUnusedLocals": true, + // "noUnusedParameters": true, + // "noFallthroughCasesInSwitch": true, + // "noPropertyAccessFromIndexSignature": true, + + // Recommended Options + "strict": true, + // "jsx": "react-jsx", + // Allow TypeScript to transform imports for CommonJS output + // "verbatimModuleSyntax": true, + "isolatedModules": true, + "noUncheckedSideEffectImports": true, + "moduleDetection": "force", + "skipLibCheck": true + }, + "include": ["src/**/*.ts", "src/**/*.mts", "src/**/*.d.ts"], + "exclude": ["tests", "vitest.config.ts", "dist", "node_modules"] +} diff --git a/test-server/vitest.config.ts b/test-server/vitest.config.ts new file mode 100644 index 00000000..bec34c31 --- /dev/null +++ b/test-server/vitest.config.ts @@ -0,0 +1,15 @@ +import { defineConfig } from 'vitest/config'; +import path from 'node:path'; + +export default defineConfig({ + test: { + environment: 'node', + include: ['tests/**/*.test.ts'], + globals: true + }, + resolve: { + alias: { + '@src': path.resolve(__dirname, 'src') + } + } +});