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Releases: BaranziniLab/UCSFOMOPAgent

UCSFOMOPAgent v0.1.0 — BioRouter Extension Bundle

06 May 03:07

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What's New

This release adds the .brxt BioRouter Extension Bundle format, enabling one-click installation directly from BioRouter.

How to Install

  1. Download ucsfomopagent.brxt below
  2. Open BioRouter → Extensions tab → Add extension
  3. Drag and drop the .brxt file (or click Browse file…)
  4. Click Next: Configure → and fill in your UCSF credentials
  5. Click Install Extension

BioRouter will install the virtual environment automatically.

Environment Variables

Variable Required Default Description
CLINICAL_RECORDS_USERNAME UCSF network username
CLINICAL_RECORDS_PASSWORD UCSF network password
OMOP_LOG_LEVEL optional INFO Logging level

Manual Installation (without BioRouter)

unzip ucsfomopagent.brxt -d ucsfomopagent
cd ucsfomopagent
CLINICAL_RECORDS_USERNAME="youruser" CLINICAL_RECORDS_PASSWORD="yourpass" uv run ucsfomopagent