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  1. COMET COMET Public

    Use this app to locally run COmprehensive Motif Evaluation Toolkit (COMET) as a webapp. COMET was developed to process high-throughput datasets for the evaluation of enzymatic specificity.

    Python

  2. COMET_IDE COMET_IDE Public

    COmprehensive Motif Evaluation Toolkit (COMET) was developed to process high-throughput datasets for the evaluation of enzymatic specificity. This non-GUI version is meant to be used with an IDE.

    Python

  3. CleaveNet CleaveNet Public

    This is a modified version of CleaveNet, an ML pipeline that can be used for substrate design and activity prediction. The program was altered to allow for training with YESS 2.0 / COMET datasets. …

    Python

  4. ProteinAlignment ProteinAlignment Public

    Align protein crystal structures.

    Jupyter Notebook