Issues

• Meet a 'ValueError: Invalid filepath extension for saving' in training

  KevinMenden/scaden#129 · Filter by author lindawillli opened on Sep 25, 2024
  2

• discrepancies in number of rows in counts and cell types expected because of heading?

  KevinMenden/scaden#128 · Filter by author ivichadriana opened on Sep 3, 2024

• AttributeError: 'numpy.ndarray' object has no attribute 'todense' with H5AD file as input for 'scaden simulate'

  KevinMenden/scaden#126 · Filter by author WanderingHedgie opened on May 3, 2024

• Scaden paper test data

  KevinMenden/scaden#125 · Filter by author jth3galv opened on Oct 10, 2023
  1

• Scaden simulate ValueError and choosing input parameters

  KevinMenden/scaden#124 · Filter by author elise-smith opened on May 23, 2023

• Illegal instruction on MacOS M1

  KevinMenden/scaden#123 · Filter by author annasoli opened on Apr 7, 2023
  2

• IndexError: arrays used as indices must be of integer (or boolean) type

  KevinMenden/scaden#122 · Filter by author Wangyananblink opened on Jul 4, 2022
  2

• ValueError: Input contains infinity or a value too large for dtype('float32').

  KevinMenden/scaden#118 · Filter by author chenjy327 opened on Dec 10, 2021
  3

• Scaden process issue

  KevinMenden/scaden#116 · Filter by author ThomasThaewel opened on Oct 6, 2021
  1

• Preparing Count-matrix

  KevinMenden/scaden#111 · Filter by author bio-visualisation opened on Aug 23, 2021

• Error when using adata object

  KevinMenden/scaden#108 · Filter by author ThomasThaewel opened on Aug 16, 2021
  3

• Simulate errors out when celltype names are only numbers, requires text prefix to run correctly.

  enhancement
  KevinMenden/scaden#100 · Filter by author nagendraKU opened on Jul 2, 2021
  1

• Pattern matching unintuitive

  KevinMenden/scaden#95 · Filter by author khkk378 opened on May 25, 2021
  2

• Simulate slow

  KevinMenden/scaden#90 · Filter by author khkk378 opened on May 20, 2021
  2

• Scaden example sometimes breaks

  bug
  KevinMenden/scaden#85 · Filter by author KevinMenden opened on Mar 25, 2021
  2

  

• Enable multiprocessing for data simulation

  enhancement
  KevinMenden/scaden#82 · Filter by author KevinMenden opened on Mar 23, 2021 · v.1.2.0
  1

• Automatic cell type labeling for easier data preparation

  enhancement
  KevinMenden/scaden#69 · Filter by author KevinMenden opened on Jan 21, 2021