Update dependencies#70
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markwilkinson
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Only new commit on upstream/next beyond the prior manual merge; the tutorial-guidelines commit (e86f46c) was already incorporated. A full git merge here would have re-surfaced the restructuring conflicts already resolved manually before, since that merge was committed without recording actual merge parentage. Co-Authored-By: Claude Sonnet 5 <noreply@anthropic.com>
MarekSuchanek
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* Tutorial section for FAIR commons * fix name for a cessda file * Rename discover-test-CESSDA-benchmark.rst to discover-test-cessda-benchmark.rst * First drafts * Fixed missing reference Due to inconsistent naming * Fixed typo * Update create-test-following-ftr.rst Added missing underscore * Fixed build errors * Update define-run-scoring-algorithm.rst Fixed indentation * Update define-run-scoring-algorithm.rst * adding tutorials related to executing tests * adding tutorials related to installing Champion * cleaning up errors * Update create-metric.rst * Update create-metric.rst * Update create-metric.rst * Update create-metric.rst * Update create-metric.rst * Update create-metric.rst * Create define-benchmark-associated-metrics.rst * Update define-benchmark-associated-metrics.rst Move John's "create-benchmark.rst" content to here. * Update create-benchmark.rst * Update and rename create-benchmark.rst to register-benchmark.rst * Update register-benchmark.rst * Update register-benchmark.rst * Update register-benchmark.rst * Update and rename create-metric.rst to register-metric.rst * Update register-benchmark.rst * Update register-metric.rst * Create find-metrics-and-benchmarks.rst * Delete docs/commons/fair/tutorials/register-curate-metric-fs.rst * Update register-metric.rst * Update register-metric.rst * Update register-metric.rst * Update find-metrics-and-benchmarks.rst * Update find-metrics-and-benchmarks.rst * Update find-test-for-digital-object.rst * Update find-test-for-digital-object.rst * Update register-metric.rst * Update find-test-for-digital-object.rst * Update find-test-for-digital-object.rst * Update find-metrics-and-benchmarks.rst * Update register-metric.rst * Update register-benchmark.rst * Update tutorial-index.rst * Update define-benchmark-associated-metrics.rst * How to comply with FTR tutorial created (#50) * Update define-benchmark-associated-metrics.rst clarified text on how to register benchmarks and metrics * Update register-metric.rst updated broken html and made it clearer when to use FAIR wizard and when to use FAIRsharing directly * add Assessment Tools subsection * Add Assessment Tools section to index.rst * Add Assessment Tools to documentation index * update content Updated the assessment tools documentation to include links to FAIR tests. * Create DMP-tests.rst Add links to DMP Tests documentation. * Add testing platforms documentation * Update index.rst * Update index.rst * up * Add assessment tools documentation * Update caption for assessment tools in documentation * Add links to DMP Tests documentation Added links to the DMP Tests documentation. * Update and rename FAIR-tests.rst to fair-tests.rst * Update dmp-tests.rst * Update testing-platforms.rst * add .. _tool-fairos: Added introductory information about the FAIROS tool and its purpose. * Update references in testing-platforms.rst * Update references in testing-platforms.rst * Fix formatting of testing platforms documentation * Update testing platforms documentation Removed references to fairos and foops from testing platforms documentation. * Add links to additional testing platforms * Update fair-tests.rst * Add links to DMP Tests documentation Added links to the DMP Tests documentation. * Document testing platforms for FAIR assessments Added a note about platforms for running FAIR assessments. * fix: correct RST structure and remove stub pages in FAIR tutorials * getting readyfor automated RTD * Toolbox section and life FAIR tests widget * Toolbox section: live FAIR test catalogue, deliverable title, open-in-new-tab links; bump to 0.2.0 * Toolbox section: live FAIR test catalogue, deliverable title, open-in-new-tab links; bump to 0.2.0 * restructure all pages to put deliverables in one place; added benchmarks and algorithms * update changelog * Update FAIR assessment validation section Removed references to ShEX and SHACL files for FTR validation. * Add FTR Assessment Record Validator documentation * Link to FAIR assessment validation * Fair tutorial guidelines (#64) * Tutorial section for FAIR commons * fix name for a cessda file * Rename discover-test-CESSDA-benchmark.rst to discover-test-cessda-benchmark.rst * First drafts * Fixed missing reference Due to inconsistent naming * Fixed typo * Update create-test-following-ftr.rst Added missing underscore * Fixed build errors * Update define-run-scoring-algorithm.rst Fixed indentation * Update define-run-scoring-algorithm.rst * adding tutorials related to executing tests * adding tutorials related to installing Champion * cleaning up errors * Update create-metric.rst * Update create-metric.rst * Update create-metric.rst * Update create-metric.rst * Update create-metric.rst * Update create-metric.rst * Create define-benchmark-associated-metrics.rst * Update define-benchmark-associated-metrics.rst Move John's "create-benchmark.rst" content to here. * Update create-benchmark.rst * Update and rename create-benchmark.rst to register-benchmark.rst * Update register-benchmark.rst * Update register-benchmark.rst * Update register-benchmark.rst * Update and rename create-metric.rst to register-metric.rst * Update register-benchmark.rst * Update register-metric.rst * Create find-metrics-and-benchmarks.rst * Delete docs/commons/fair/tutorials/register-curate-metric-fs.rst * Update register-metric.rst * Update register-metric.rst * Update register-metric.rst * Update find-metrics-and-benchmarks.rst * Update find-metrics-and-benchmarks.rst * Update find-test-for-digital-object.rst * Update find-test-for-digital-object.rst * Update register-metric.rst * Update find-test-for-digital-object.rst * Update find-test-for-digital-object.rst * Update find-metrics-and-benchmarks.rst * Update register-metric.rst * Update register-benchmark.rst * Update tutorial-index.rst * Update define-benchmark-associated-metrics.rst * How to comply with FTR tutorial created (#50) * Update define-benchmark-associated-metrics.rst clarified text on how to register benchmarks and metrics * Update register-metric.rst updated broken html and made it clearer when to use FAIR wizard and when to use FAIRsharing directly * add Assessment Tools subsection * Add Assessment Tools section to index.rst * Add Assessment Tools to documentation index * update content Updated the assessment tools documentation to include links to FAIR tests. * Create DMP-tests.rst Add links to DMP Tests documentation. * Add testing platforms documentation * Update index.rst * Update index.rst * up * Add assessment tools documentation * Update caption for assessment tools in documentation * Add links to DMP Tests documentation Added links to the DMP Tests documentation. * Update and rename FAIR-tests.rst to fair-tests.rst * Update dmp-tests.rst * Update testing-platforms.rst * add .. _tool-fairos: Added introductory information about the FAIROS tool and its purpose. * Update references in testing-platforms.rst * Update references in testing-platforms.rst * Fix formatting of testing platforms documentation * Update testing platforms documentation Removed references to fairos and foops from testing platforms documentation. * Add links to additional testing platforms * Update fair-tests.rst * Add links to DMP Tests documentation Added links to the DMP Tests documentation. * Document testing platforms for FAIR assessments Added a note about platforms for running FAIR assessments. * fix: correct RST structure and remove stub pages in FAIR tutorials * getting readyfor automated RTD * Toolbox section and life FAIR tests widget * Toolbox section: live FAIR test catalogue, deliverable title, open-in-new-tab links; bump to 0.2.0 * Toolbox section: live FAIR test catalogue, deliverable title, open-in-new-tab links; bump to 0.2.0 * restructure all pages to put deliverables in one place; added benchmarks and algorithms * update changelog --------- Co-authored-by: John Shepherdson <107628491+john-shepherdson@users.noreply.github.com> Co-authored-by: markwilkinson <mark.wilkinson@upm.es> Co-authored-by: saracuriel <144734028+saracuriel@users.noreply.github.com> Co-authored-by: esgg <eg.guardia@gmail.com> Co-authored-by: Allyson Lister <allyson.lister@oerc.ox.ac.uk> Co-authored-by: Mark Wilkinson <markw@illuminae.com> * in the middle, but want to merge upstream first, in case it solves the problem: * Bump version to 0.4.0 and log the upstream merge/cleanup Also corrects conf.py's release string, which had drifted a version behind the CHANGELOG (stuck at 0.2.0 while CHANGELOG already listed 0.3.0). Co-Authored-By: Claude Sonnet 5 <noreply@anthropic.com> * merge of upstream 'next' inclujding tutorial. Fixed all conflicts, and restructured all menus to be hierarchical. Modified a bit of documentation. Assistance from Claude Code * Update CHANGELOG for hierarchical toolbox menus and content fixes Documents the remaining work under the still-unreleased 0.4.0 entry: five new section pages that make the Toolbox sidebar properly hierarchical, page-title fixes for two toctree-only pages that were silently flattening a level of nesting, and several content corrections (duplicate authoring.rst entry, wrong FAIRassist search param, capitalization, validator retitle). Co-Authored-By: Claude Sonnet 5 <noreply@anthropic.com> * updates and tweaks. Ready to PR * tweak openair validator * all pages checked. ready to PR * Cherry-pick upstream dependency and CI action updates (#70) Only new commit on upstream/next beyond the prior manual merge; the tutorial-guidelines commit (e86f46c) was already incorporated. A full git merge here would have re-surfaced the restructuring conflicts already resolved manually before, since that merge was committed without recording actual merge parentage. Co-Authored-By: Claude Sonnet 5 <noreply@anthropic.com> * add renauds list of tools --------- Co-authored-by: Andres Tabima <andres.romero@tuwien.ac.at> Co-authored-by: John Shepherdson <107628491+john-shepherdson@users.noreply.github.com> Co-authored-by: markwilkinson <mark.wilkinson@upm.es> Co-authored-by: saracuriel <144734028+saracuriel@users.noreply.github.com> Co-authored-by: esgg <eg.guardia@gmail.com> Co-authored-by: Allyson Lister <allyson.lister@oerc.ox.ac.uk> Co-authored-by: Claude Sonnet 5 <noreply@anthropic.com>
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