ClinVarTuring tests AI models in personalized medicine
NOTE: At this stage this is a PoC, it shows that the ClinVar XML dataset can be used built data for fine tunning a generative model.
- Source data: https://ftp.ncbi.nlm.nih.gov/pub/clinvar/xml/
- BioGPT: generative pre-trained transformer for biomedical text generation and mining https://academic.oup.com/bib/article/23/6/bbac409/6713511
- GeneTuring tests GPT models in genomics: https://www.biorxiv.org/content/10.1101/2023.03.11.532238v1.full.pdf
- https://github.com/microsoft/BioGPT
- https://github.com/sahil280114/codealpaca
- https://github.com/gururise/AlpacaDataCleaned
- https://github.com/chris-alexiuk/alpaca-lora