Issues

• cutsite_width in call_alleles

  YosefLab/Cassiopeia#285 · Filter by author BiotechPedro opened on May 22, 2026

• No chemistries for stereo-seq?

  YosefLab/Cassiopeia#258 · Filter by author Counts-Xin opened on Mar 25, 2025

• filter_molecule_table

  YosefLab/Cassiopeia#257 · Filter by author Counts-Xin opened on Mar 14, 2025

• pypi release

  YosefLab/Cassiopeia#256 · Filter by author Zethson opened on Mar 9, 2025

• Segmentation fault in cas.pp.align_sequences

  YosefLab/Cassiopeia#246 · Filter by author peipp410 opened on Aug 1, 2024

• Potential Bug in intBC extract

  YosefLab/Cassiopeia#237 · Filter by author jefferyUstc opened on Feb 21, 2024
  1

• “Error” in function error_correct_intbcs_to_whitelist

  YosefLab/Cassiopeia#234 · Filter by author jefferyUstc opened on Dec 30, 2023

• Computing tree likelihoods

  YosefLab/Cassiopeia#231 · Filter by author Marius1311 opened on Oct 26, 2023

• results produced by ilp_solver

  YosefLab/Cassiopeia#188 · Filter by author ask-more-questions opened on Feb 26, 2023
  5

• issues about assign_lineage_groups() function

  YosefLab/Cassiopeia#187 · Filter by author AmoriLi opened on Nov 22, 2022

• make test error

  YosefLab/Cassiopeia#183 · Filter by author ask-more-questions opened on Aug 11, 2022
  8

• Failed Numbaization of Distance Function is Not Caught

  bug
  YosefLab/Cassiopeia#179 · Filter by author ivalexander13 opened on Apr 12, 2022
  1

• File names, import issues

  YosefLab/Cassiopeia#172 · Filter by author adamgayoso opened on Feb 4, 2022

• Implement Utilities from KP-Tracer MS

  enhancement
  YosefLab/Cassiopeia#149 · Filter by author mattjones315 opened on Oct 25, 2021
  

• unify importing in codebase

  enhancement
  YosefLab/Cassiopeia#128 · Filter by author Lioscro opened on Aug 5, 2021