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@rnabioco

RNA Bioscience Initiative (RBI)

CU Anschutz // RNA Bioscience Initiative

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  1. aa-tRNA-seq-pipeline aa-tRNA-seq-pipeline Public

    Snakemake pipeline to process nanopore aa-tRNA-seq data

    Python 3 2

  2. clover clover Public

    R package for analysis of nanopore tRNA sequencing data

    R

  3. valr valr Public

    Genome Interval Arithmetic in R

    R 95 24

  4. squiggy-positron squiggy-positron Public

    Positron extension to visualize POD5 nanopore signals

    TypeScript

  5. aform-rs aform-rs Public

    TUI for Stockholm MSA viz/edit

    Rust

Repositories

Showing 10 of 97 repositories
  • bodhi-docs Public

    Bodhi slurm migration guide

    rnabioco/bodhi-docs’s past year of commit activity
    Shell 0 0 3 0 Updated Mar 29, 2026
  • remote-ssh-positron Public

    Positron on CU compute clusters

    rnabioco/remote-ssh-positron’s past year of commit activity
    Shell 5 0 1 0 Updated Mar 29, 2026
  • clover Public

    R package for analysis of nanopore tRNA sequencing data

    rnabioco/clover’s past year of commit activity
    R 0 0 5 1 Updated Mar 28, 2026
  • molb-7950 Public

    MOLB 7950: Informatics and Statistics for Molecular Biology

    rnabioco/molb-7950’s past year of commit activity
    HTML 4 0 9 1 Updated Mar 27, 2026
  • fcount-rs Public

    Rust-based exon counting optimized for RNA-seq

    rnabioco/fcount-rs’s past year of commit activity
    Rust 1 MIT 0 2 0 Updated Mar 27, 2026
  • squiggy-positron Public

    Positron extension to visualize POD5 nanopore signals

    rnabioco/squiggy-positron’s past year of commit activity
    TypeScript 0 MIT 0 20 8 Updated Mar 25, 2026
  • aa-tRNA-seq-pipeline Public

    Snakemake pipeline to process nanopore aa-tRNA-seq data

    rnabioco/aa-tRNA-seq-pipeline’s past year of commit activity
    Python 3 MIT 2 3 3 Updated Mar 24, 2026
  • 2026-johnson-m6a Public
    rnabioco/2026-johnson-m6a’s past year of commit activity
    Python 0 0 0 0 Updated Mar 19, 2026
  • morrison-chronic-chikv-xenium Public

    Quantification of CHIKV RNA at 28 dpi using spatial transcriptomics

    rnabioco/morrison-chronic-chikv-xenium’s past year of commit activity
    R 1 0 0 0 Updated Mar 13, 2026
  • morrison-chronic-chikv Public

    Quantification of CHIKV RNA at 28 dpi using scRNA-seq

    rnabioco/morrison-chronic-chikv’s past year of commit activity
    HTML 1 0 0 0 Updated Mar 13, 2026
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