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@virtualcell

Virtual Cell

A Modeling and Simulation Environment for Cell Biology

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  1. vcell vcell Public

    Virtual Cell Framework

    Java 139 35

  2. vcell-fvsolver vcell-fvsolver Public

    VCell Finite Volume PDE solver

    C++ 2 1

  3. vcell-solvers vcell-solvers Public

    Virtual Cell solvers

    C 7 6

  4. vcell-fiji vcell-fiji Public

    A tool that loads VCell simulation results into ImageJ and performs statistical analysis.

    Java 2 1

  5. pyvcell pyvcell Public

    Python 4

  6. libvcell libvcell Public

    Java 1

Repositories

Showing 10 of 32 repositories
  • vcell-fvsolver Public

    VCell Finite Volume PDE solver

    virtualcell/vcell-fvsolver's past year of commit activity
    C++ 2 1 1 4 Updated Sep 30, 2026
  • vcell-chombo Public
    virtualcell/vcell-chombo's past year of commit activity
    C++ 0 MIT 0 0 1 Updated Sep 30, 2026
  • vcell-nfsim Public

    NFsim library and standalone executable.

    virtualcell/vcell-nfsim's past year of commit activity
    C++ 0 MIT 0 0 1 Updated Sep 30, 2026
  • vcell Public

    Virtual Cell Framework

    virtualcell/vcell's past year of commit activity
    Java 139 35 298 (3 issues need help) 36 Updated Sep 30, 2026
  • vcell-ode Public

    The ODE focused solvers VCell utilizes in it's main applications

    virtualcell/vcell-ode's past year of commit activity
    C 1 0 4 0 Updated Sep 30, 2026
  • vcell-hy3s Public

    Standalone repo for vcell hy3s solver

    virtualcell/vcell-hy3s's past year of commit activity
    C 0 MIT 0 0 0 Updated Sep 30, 2026
  • vcell-mbsolver Public

    Moving boundary solver standalone, linkable library and python bindings.

    virtualcell/vcell-mbsolver's past year of commit activity
    C 1 MIT 0 1 1 Updated Sep 30, 2026
  • vcell-stochastic Public

    Library and standalone binary for Stochastic solver.

    virtualcell/vcell-stochastic's past year of commit activity
    C++ 0 MIT 0 0 0 Updated Sep 30, 2026
  • pyvcell Public
    virtualcell/pyvcell's past year of commit activity
    Python 4 MIT 0 6 3 Updated Sep 29, 2026
  • VCell-AI Public

    An AI-powered platform for discovering, analyzing, and exploring biomodels from the VCell database. Built as part of Google Summer of Code (GSoC25), this project combines modern web technologies with AI capabilities to provide an intuitive interface for scientific model research.

    virtualcell/VCell-AI's past year of commit activity
    TypeScript 14 MIT 14 24 20 Updated Sep 28, 2026
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