[Feat] Site Tooling

[RichardAnderson]

This pull request introduces several enhancements and refactorings to the site's tooling and user isolation management, as well as improvements to real-time update broadcasting for site and server changes. The main themes are: expanding and standardizing isolated user and tooling management, adding new actions for site tooling installation/uninstallation, and ensuring clients are notified of important changes via broadcast events.

If you have any existing Mise Bun / Mise Node sites (introduced by another PR in 4.x) then you will need to run one or both of the below commands to "update" your sites to the new system.

php artisan tinker --execute="echo App\Models\Site::where('type', 'mise_bun')->update(['type' => 'bun']);"
php artisan tinker --execute="echo App\Models\Site::where('type', 'mise_nodejs')->update(['type' => 'node']);"

[Copilot]

Pull request overview

This PR expands Vito’s “site tooling” and isolated user management by introducing an isolated_users model/table, a tooling registry (mise-based) with install/uninstall workflows, new proxied site types (Node/Bun) with bootstrap worker behavior, and broader real-time broadcasting so clients receive updated site/server warnings and state.

Changes:

• Add isolated_users persistence + backfill migration, plus model/factory support and back-compat accessors/tests.
• Introduce a tooling abstraction (registry + providers + UI + jobs) and standardize PATH/environment injection via SiteShellEnvironment.
• Add/replace proxied site types (node, bun) with first-deploy bootstrap worker creation and improved broadcast-driven UI updates.

Reviewed changes

Copilot reviewed 118 out of 124 changed files in this pull request and generated 5 comments.

Show a summary per file

File	Description
tests/Unit/SiteShellEnvironmentTest.php	Unit coverage for PATH/env collection and wrapping behavior.
tests/Unit/NodeSiteTest.php	Unit coverage for Node site type command generation/script defaults.
tests/Unit/Models/SiteTypeResolutionTest.php	Ensures legacy type strings resolve and deprecated NodeJS throws.
tests/Unit/MiseSiteTypeTest.php	Removes legacy Mise site type tests.
tests/Unit/MiseBunSiteTypeTest.php	Removes legacy Mise Bun tests.
tests/Unit/IsolatedUserModelTest.php	Unit coverage for installed_tooling read/write + lock key compatibility.
tests/Unit/BunSiteTest.php	Unit coverage for Bun site type behavior and script defaults.
tests/Unit/AbstractProxiedSiteTypeTest.php	Unit coverage for proxied site behaviors and supervisor template rendering.
tests/Feature/WorkersTest.php	Feature tests for protecting site-managed (bootstrap) workers.
tests/Feature/WarningsBroadcastTest.php	Feature tests verifying broadcasted warning payloads.
tests/Feature/SitesTest.php	Updates site creation datasets for new Node/Bun site types/tooling fields.
tests/Feature/SiteSettingsProxiedSiteTest.php	Feature tests for proxied-site settings (port/start command) and warnings.
tests/Feature/SiteAccessorBackcompatTest.php	Ensures legacy sites.user / ssh key fields still behave with new iuser FK.
tests/Feature/IsolatedUserMigrationTest.php	Validates isolated user backfill migration logic.
tests/Feature/ApplicationTest.php	Ensures Application page passes bootstrap worker only for proxied sites.
tests/Feature/API/WorkersTest.php	API coverage for bootstrap worker edit/delete restrictions.
tests/Feature/AfterDeployHookTest.php	Ensures after-deploy bootstrap worker creation/adoption behavior.
resources/views/ssh/services/process-manager/supervisor/restart-worker.blade.php	Adds reread/update before restart for worker restarts.
resources/views/ssh/mise/uninstall-runtime.blade.php	Adds mise runtime uninstall script.
resources/views/ssh/mise/install-runtime.blade.php	Makes mise shims available in interactive shells by updating rc files.
resources/js/types/worker.d.ts	Adds is_site_bootstrap to worker TS type.
resources/js/types/site.d.ts	Adds isolated user + proxied-site fields and new warning union member.
resources/js/types/site-tooling.d.ts	Adds props/types for site tooling UI page.
resources/js/types/isolated-user.d.ts	Switches from specific runtime fields to runtime_versions map.
resources/js/types/index.d.ts	Adds tooling config catalogue + ToolingDescriptor type.
resources/js/types/dynamic-field-config.d.ts	Adds tooling field types + optionLabels support.
resources/js/pages/workers/components/worker-row-actions.tsx	Extracts worker action/log dialogs into reusable component.
resources/js/pages/workers/components/columns.tsx	Disables edit/delete UI for site-managed workers; adds tooltip messaging.
resources/js/pages/sites/show.tsx	Uses realtime record hook for site updates.
resources/js/pages/site-tooling/index.tsx	New tooling management page with socket-driven reload/toasts.
resources/js/pages/site-tooling/components/tooling-table.tsx	Tooling table UI (install/uninstall, status indicators, confirmation dialog).
resources/js/pages/site-settings/components/start-command.tsx	New dialog UI for updating proxied-site start command.
resources/js/pages/site-settings/components/port.tsx	New dialog UI for updating proxied-site port.
resources/js/pages/servers/overview.tsx	Switches overview to realtime server record.
resources/js/pages/application/components/proxied-app-card.tsx	New proxied-site card (port/start command/worker controls).
resources/js/pages/application/components/deployment-script.tsx	Shows available tooling commands and links to Tooling area.
resources/js/pages/application/components/app-with-deployment.tsx	Integrates proxied app card and realtime site record into Application page.
resources/js/layouts/server/layout.tsx	Adds “Tooling” nav item for isolated/ready sites.
resources/js/components/site-banners.tsx	Adds “needs first deploy” banner.
resources/js/components/server-banners.tsx	Moves reboot/updates banners to warning-based payload from server resource.
database/migrations/2026_05_24_100123_create_isolated_users_table.php	Creates isolated_users, adds sites.isolated_user_id, backfills data.
database/factories/SiteFactory.php	Auto-creates/assigns isolated user after creating isolated sites.
database/factories/IsolatedUserFactory.php	Adds isolated user factory.
config/app.php	Registers ToolingServiceProvider.
app/WorkflowActions/Site/CreateNodeJsSite.php	Updates workflow input contract for new node site type fields.
app/Tooling/YarnTooling.php	Adds Yarn tooling provider descriptor.
app/Tooling/ToolingRegistry.php	Adds tooling registry lookup + command reference detection.
app/Tooling/ToolingInterface.php	Defines tooling provider interface.
app/Tooling/SiteToolingState.php	Centralizes tooling status/version updates + socket broadcast.
app/Tooling/PnpmTooling.php	Adds pnpm tooling provider descriptor.
app/Tooling/NodeTooling.php	Adds Node tooling provider descriptor.
app/Tooling/BunTooling.php	Adds Bun tooling provider descriptor.
app/Tooling/AbstractTooling.php	Base tooling implementation helpers.
app/Tooling/AbstractMiseTooling.php	Mise-based tooling install/uninstall implementations.
app/Tables/SiteTable.php	Eager-loads isolated user and delegates warnings to model method.
app/Tables/ServerTable.php	Delegates warnings to model method.
app/SSH/Mise/Mise.php	Adds uninstall runtime support.
app/SiteTypes/SiteType.php	Extends interface with afterDeploy + defaultDeploymentScript.
app/SiteTypes/PHPSite.php	Migrates create-time tooling to registry-based implementation.
app/SiteTypes/PHPBlank.php	Reuses PHPSite rules/data and registry-based tooling installation.
app/SiteTypes/NodeSite.php	New proxied Node site type using tooling picker/selector + script defaults.
app/SiteTypes/NodeJS.php	Deprecates legacy NodeJS site type (throws on install).
app/SiteTypes/MiseSiteType.php	Removes legacy Mise base site type.
app/SiteTypes/MiseNodeJS.php	Removes legacy Mise Node site type.
app/SiteTypes/MiseBun.php	Removes legacy Mise Bun site type.
app/SiteTypes/Concerns/UsesMiseRuntime.php	Removes legacy Mise runtime concern.
app/SiteTypes/BunSite.php	New proxied Bun site type using tooling picker + script defaults.
app/SiteTypes/AbstractSiteType.php	Adds deployment env collection, afterDeploy hook, tooling install helper.
app/SiteTypes/AbstractProxiedSiteType.php	New base for proxied sites + bootstrap worker behavior + default scripts.
app/Services/ProcessManager/Supervisor.php	Refactors to Worker-based config writing/creation APIs.
app/Services/ProcessManager/ProcessManager.php	Updates interface to accept Worker + add writeConfig().
app/Providers/WorkflowServiceProvider.php	Removes legacy “create-nodejs-site” workflow action registration.
app/Providers/ToolingServiceProvider.php	Registers tooling providers in config.
app/Providers/SiteTypeServiceProvider.php	Registers new Node/Bun site types and updates PHP/Laravel tooling fields.
app/Policies/WorkerPolicy.php	Prevents deletion of site-managed bootstrap workers.
app/Models/Worker.php	Adds environment composition + isSiteBootstrap() helper.
app/Models/Server.php	Adds isolatedUsers relation and server warning generation.
app/Models/Metric.php	Broadcasts server updates when reboot-required state transitions.
app/Models/IsolatedUser.php	New model for isolated users + tooling state helpers + lock.
app/Jobs/Worker/RefreshSiteWorkerConfigsJob.php	Job to refresh worker configs/restart workers based on tooling changes.
app/Jobs/Worker/EditJob.php	Uses new process manager API to recreate worker config.
app/Jobs/Worker/CreateJob.php	Uses new process manager API and broadcasts site update after worker create.
app/Jobs/SSL/CreateLetsEncryptWildcardSslJob.php	Broadcasts site updates for sites affected by wildcard SSL changes.
app/Jobs/Site/Tooling/UninstallSiteToolingJob.php	Adds async tooling uninstall workflow + worker refresh dispatch.
app/Jobs/Site/Tooling/InstallSiteToolingJob.php	Adds async tooling install workflow + worker refresh dispatch.
app/Jobs/Site/DeployJob.php	Calls site-type afterDeploy hook and broadcasts site update after deploy.
app/Jobs/HostedDomain/SetupHostedDomainSslJob.php	Broadcasts site updates on SSL setup success/failure.
app/Http/Resources/WorkerResource.php	Exposes is_site_bootstrap to clients.
app/Http/Resources/SiteResource.php	Exposes isolated user/proxied-site fields and delegates warnings to model.
app/Http/Resources/ServerResource.php	Exposes server warnings.
app/Http/Controllers/WorkerController.php	Eager-loads site data needed to compute bootstrap worker flag.
app/Http/Controllers/SiteToolingController.php	Adds tooling page + install/uninstall endpoints for sites.
app/Http/Controllers/SiteSettingController.php	Adds port/start-command update endpoints (Action-driven).
app/Http/Controllers/ApplicationController.php	Passes bootstrap worker for proxied site types to the Application page.
app/Helpers/SiteShellEnvironment.php	Centralizes env/PATH computation and command wrapping for site shells.
app/Enums/NodePackageManager.php	Adds mapping between tool ids and package manager enum.
app/DTOs/DynamicField.php	Adds tooling field builders and option label support.
app/Actions/Worker/RefreshSiteWorkerConfigs.php	Refreshes supervisor configs and restarts impacted workers after tooling changes.
app/Actions/Worker/EditWorker.php	Blocks editing site-managed bootstrap workers with validation error.
app/Actions/Worker/DeleteWorker.php	Blocks deleting site-managed bootstrap workers with validation error.
app/Actions/SSL/AssignSslToDomains.php	Broadcasts site update when hosted domain SSL assignment changes.
app/Actions/Site/UpdateVhostGeneration.php	Broadcasts site update after toggling vhost generation.
app/Actions/Site/UpdateStartCommand.php	Adds Action for updating proxied-site start command + worker config write.
app/Actions/Site/UpdatePort.php	Adds Action for updating proxied-site port + vhost regeneration.
app/Actions/Site/UpdatePHPVersion.php	Uses isolated user lock where available.
app/Actions/Site/Tooling/UninstallSiteTooling.php	Adds Action to validate and dispatch uninstall tooling job + status set.
app/Actions/Site/Tooling/InstallSiteTooling.php	Adds Action to validate and dispatch install tooling job + status set.
app/Actions/Site/Tooling/GetSiteTooling.php	Supplies props for tooling page (siblings, installed versions, statuses).
app/Actions/Site/GetIsolatedUsers.php	Switches isolated user listing to iuser-backed version map.
app/Actions/Site/EnableSsl.php	Broadcasts site update after enabling SSL.
app/Actions/Site/DisableSsl.php	Broadcasts site update after disabling SSL.
app/Actions/Site/DeleteSite.php	Deletes isolated user record when last sibling site is removed.
app/Actions/Site/CreateSite.php	Creates/links isolated user during site creation and locks tooling to existing iuser versions.
app/Actions/Site/BroadcastSiteUpdate.php	Central helper for broadcasting site.updated.
app/Actions/Server/BroadcastServerUpdate.php	Central helper for broadcasting server.updated.
app/Actions/HostedDomain/ReactivateHostedDomain.php	Broadcasts site update when hosted domain reactivation starts.
app/Actions/HostedDomain/DeleteHostedDomain.php	Broadcasts site update after hosted domain deletion + vhost update.
app/Actions/HostedDomain/DeactivateHostedDomain.php	Broadcasts site update after deactivation + vhost update.
app/Actions/HostedDomain/ActivateHostedDomain.php	Broadcasts site update after activation.
app/Actions/Bootstrap/GetBootstrap.php	Adds tooling catalogue to bootstrap configs.